Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun372g00018 ATGATGACATTGGTTGACGAGGTGGAGGTGGAGATGGAGGCGTCGGTGCCGGTAACGAAGGTGCCGTACGGTGACGTATTCGAGGCGTCCCGCGCTGGCGACGTGGACCGGCTCCGGTACCTGCTGGAGACAGGCGTGAACGTGAACGCGCGGGATCAGTGGGACTCGGTGGCCCTGTACTACGCCTGCCTAACCGGCCACCTCGACGCTGCTCGAATGCTCCTCGAAAACGGCGCCATCTGCTCCGAGCACACCTTTGACGGCGATCGCTGCCACTACGCGGCCCTCAATCTCAAGGTCCGCAAACTCCTCAAGGCATTCGAGGCCCGGCCTCCGCCCTTGGACCCCTTGCAGGCTTCTTTGCGGGACACCTTCCTCGCCTGTATTTCATCCACTCAGGGGTCCATTTGCTGCCACTTCCCTCCAGATGTAGTATTCATTGTACAAGGAAAACGTATTCAAACTCACAGAGTCATATTAAGTGCGAGGTCACCATTTTTCAAGAAAAAGTTTACTACTGATTGGAAGGATCGCAATGAAGTTAGATTCTCAAGGGAAAGGTTGTCATATCCTGCACTTTATAGCCTTATACACTTCTTTTATTCAGACAGATTAGAGATTGCCATCGATGACATGGAGGATCTTGTGAGAATCTGCAAAGTATGCAGATGTGAATCACTGCATAAAGTTCTTGAGAAAGAAGTAATTCATCAAAAATATGCAGATTATAAAGCACTGGGAGATGTAGATAAATCTCAGAAGCGGTATATTTTACAAGGTCTATCCCTTCCTGAAGAAGACAGGCTTCCTGCTTCCTTGCATCGAATCCTTCTGACTGCCCTTTTGAATTCAACCCATGAAAGTGGTCAAGAAGATCAATTGGTTTCTATGATGGATGCCATGCAGATGGCCAAATCTGTGGATGATCTTGCTGATGTTTGTGTAAAAGTTGATAGTAATATTTTCCGCTGCCACCAAGTTATTCTGGCATCCAGGTCAGAATATTTCAAAGCAAGATTATCACATATGAAGGACTTTCATGAGGGGAAATATGAGATATCTGTTGACACTCTTCCTTGTCTGGAAGAACATGACTTAAGCAGGGAAGCTTTTGAGAAAATGATTGAATATATGTAA 1137 0.4697 MMTLVDEVEVEMEASVPVTKVPYGDVFEASRAGDVDRLRYLLETGVNVNARDQWDSVALYYACLTGHLDAARMLLENGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLDPLQASLRDTFLACISSTQGSICCHFPPDVVFIVQGKRIQTHRVILSARSPFFKKKFTTDWKDRNEVRFSRERLSYPALYSLIHFFYSDRLEIAIDDMEDLVRICKVCRCESLHKVLEKEVIHQKYADYKALGDVDKSQKRYILQGLSLPEEDRLPASLHRILLTALLNSTHESGQEDQLVSMMDAMQMAKSVDDLADVCVKVDSNIFRCHQVILASRSEYFKARLSHMKDFHEGKYEISVDTLPCLEEHDLSREAFEKMIEYM* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun372g00018 378 ProSiteProfiles Ankyrin repeat profile. 29 53 IPR002110 GO:0005515
Phacun372g00018 378 ProSiteProfiles BTB domain profile. 142 209 IPR000210 GO:0005515
Phacun372g00018 378 Pfam Ankyrin repeats (many copies) 28 75 IPR002110 GO:0005515
Phacun372g00018 378 SUPERFAMILY POZ domain 296 378 IPR011333 -
Phacun372g00018 378 Pfam BTB/POZ domain 140 238 IPR000210 GO:0005515
Phacun372g00018 378 Pfam BTB/POZ domain 309 378 IPR000210 GO:0005515
Phacun372g00018 378 FunFam BTB/POZ domain-containing protein 20 138 - -
Phacun372g00018 378 CDD BTB_POZ_ZBTB_KLHL-like 310 378 - -
Phacun372g00018 378 FunFam BTB/POZ domain-containing protein 137 258 - -
Phacun372g00018 378 Gene3D Potassium Channel Kv1.1; Chain A 134 235 IPR011333 -
Phacun372g00018 378 SUPERFAMILY Ankyrin repeat 28 105 IPR036770 -
Phacun372g00018 378 Gene3D - 26 111 IPR036770 -
Phacun372g00018 378 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 14 378 IPR044515 -
Phacun372g00018 378 Gene3D Potassium Channel Kv1.1; Chain A 289 378 IPR011333 -
Phacun372g00018 378 SMART BTB_4 142 239 IPR000210 GO:0005515
Phacun372g00018 378 ProSiteProfiles BTB domain profile. 311 378 IPR000210 GO:0005515
Phacun372g00018 378 SUPERFAMILY POZ domain 139 234 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phacun372g00018 BTB 1.7e-17 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun372g00018 K10520 - gmx:100812009 649.047