Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun372g00010 ATGAGAAGAAAGAGTGCAGGGAGACGTAGGGTTGCGGGATGTGCAACTGTGACTGTTCCTTCCCTCGTCGCCATTCCTCTCCTTTCGGATGAACATAACGCAACTGCGTTTCATAGTGAGAGTGACAATGACGATTGCGTTCATCACCGTCCCGAACCTGGACCCGAGCTTGTGGATTGGTTGGACAAGATCATCTGCATATGCTGCGACGAGAAAGGCGAAGAGGGAATTTTGGTTTGCAGCGAAAGCCGATGCCCCGTCACCGTACATTCCAACTGCATCGGTTCCGAACCTAAATTCGATGATTCGGGTAACTTCTACTGCCCCTACTGCTGGTACAAGCGCGTCGTGGACACGTGTCAACAACTGAGAGAGAAATCCCTGGTCGCAAAGAAAGCTTTGTCACACTTTTTGGACAGTGGCGCACGTCCAGATACTGCTGTTGCACGTGCAGATACTGCTGTTGCACGTGCAGATTCTGCTGTTGCACGTGCAGATTCTGCTGTTGCACGTGCAGATTCTTCTGTTGCACGTGAAGATTCTTCTGTTGCACGTGCGGGCTTGGTTCAGGATAGGAAAGAATGTGTGGAGGAAACACAATATGAAGAGAATAATAATAAAGATGAAGAAAAGGTGTTGTTGTCTGTGACGGTTAGTTCTGTGAGCGAGACCAATGATGAAGAACCCAATGTCATTTCAGGAAAGAAAAGGAAGGACAAGAGGAAGGATCCTTCTGCAAGGAGGAAGTGTTTCTTACAACAAGAAGAGCATGCACATTATAACACCAGAAGGAAAATTGCTGGTAATGTAGGAGAGGAGGAAGTTACAAGCTTCCAAAATTTGAGGCGACCACAGAGGTCGCCCGTGAAAGGAATGAAGCGGACTTCACTGACTGCAAAGCGCAAGAGATTACTTTGGACTGCTGAAGAAGAAAAAGTTCTAAAGGAAGGTGTATTAAAGTTCTCAATAGAAAATCAGAATACCCCTTGGAGGAAAATTTTGGAATTTGGTTGTCATGTATTTGACAAGACTCGAACTCCGGTTGATCTTAAGGATAAATGGAAGAACATTATCTCCAAGGAAGGAATTTAG 1092 0.4588 MRRKSAGRRRVAGCATVTVPSLVAIPLLSDEHNATAFHSESDNDDCVHHRPEPGPELVDWLDKIICICCDEKGEEGILVCSESRCPVTVHSNCIGSEPKFDDSGNFYCPYCWYKRVVDTCQQLREKSLVAKKALSHFLDSGARPDTAVARADTAVARADSAVARADSAVARADSSVAREDSSVARAGLVQDRKECVEETQYEENNNKDEEKVLLSVTVSSVSETNDEEPNVISGKKRKDKRKDPSARRKCFLQQEEHAHYNTRRKIAGNVGEEEVTSFQNLRRPQRSPVKGMKRTSLTAKRKRLLWTAEEEKVLKEGVLKFSIENQNTPWRKILEFGCHVFDKTRTPVDLKDKWKNIISKEGI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun372g00010 363 MobiDBLite consensus disorder prediction 229 247 - -
Phacun372g00010 363 SUPERFAMILY Homeodomain-like 301 358 IPR009057 -
Phacun372g00010 363 ProSiteProfiles Myb-like domain profile. 298 358 IPR001005 -
Phacun372g00010 363 SUPERFAMILY FYVE/PHD zinc finger 58 115 IPR011011 -
Phacun372g00010 363 Pfam Myb-like DNA-binding domain 306 357 IPR001005 -
Phacun372g00010 363 CDD SANT_TRF 306 358 - -
Phacun372g00010 363 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 38 361 - -
Phacun372g00010 363 ProSitePatterns Zinc finger PHD-type signature. 66 111 IPR019786 -
Phacun372g00010 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 298 362 IPR017930 -
Phacun372g00010 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 148 IPR013083 -
Phacun372g00010 363 SMART sant 302 360 IPR001005 -
Phacun372g00010 363 CDD PHD_SF 65 111 - -
Phacun372g00010 363 MobiDBLite consensus disorder prediction 220 247 - -
Phacun372g00010 363 Gene3D - 295 359 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun372g00010 303 357 Single Myb Histone (SMH) Gene Family AT3G49850 48.214 1.78e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun372g00010 - - vun:114169284 503.056