Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun372g00003 ATGGTAGCTATGTGTTTTTGGCGTCCAGCAGGTCTTGCTGTTGGGGCTATTGCTGGAATAGTTGTTGGAGTTGTGGCAGTTCTTCTTCTATTAGGAGTTTTTATATATTTTAGAAGATTCCGGAAGAAGATACAGAAGGATGAACTTCCACGAGATTCTAGTGCACTCTTTGCTCAACATGGGAAGGATGAAGCTTCTCGTAGTAGTGCGAATGAAACTTTAGGACCTGGTGGTCCTGCCGCCATCACAGGCATAAAAGTGGACAACTCGGTGGTATTCACATATGAGGAACTGGCAACTGCCACAGATAATTTTAGTTTGGCTAATAAAATTGGTCAAGGAGGTTTTGGGTCAGTCTATTATGCGGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAAAGAATTTCTCGCTGAATTGAAAGTCTTGACACGTGTTCATCATTTAAACTTGGTGCGGTTGATTGGGTATAGCATCGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAAAATGGAAACCTAAGTCAACATCTGCGTGGTTCAGGTAGTAGAGAACCACTGCCATGGGCTACTCGTGTGCAGATTGCTTTGGATTCTGCAAGAGGTCTTGAGTATATTCACGAGCATACAGTGCCTTTATATATTCATCGTGACATAAAGTCAGCAAATATATTAATAGACAAAAACTTCCGGGGCAAGGTTGCTGATTTTGGATTAACCAAACTTACAGAAGTTGGAAGTTCATCACTTCCCACAGGTCGCCTAGTTGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGACGTGTATGCTTTTGGAGTCGTTCTTTATGAACTTATTTCGGCTAAGGAAGCAATTGTCAAGACAAACGATTCTGCTGTCGACTCAAAGGGCCTAGTAGCTCTGTTTGATGGAGTTTTTGGTCAGCCGGATCCCACTGAAGATCTCTGCAAACTAGTTGATCCAAGGCTTGGGGATAACTACCCAATTGATTCTGTCCGCAAGATGGCACAACTAGCCAAAGCATGCACACAAGACAATCCGCAACTCCGTCCAAGTATGAGATCTATTGTGGTAGCGTTGATGACACTTTCTTCAACTACAGACGAGTGGGATGTTGGTTCTTTCTATGAAAATCAAAATCTTGTGAATCTAATGTCAGGAAGATAG 1218 0.4261 MVAMCFWRPAGLAVGAIAGIVVGVVAVLLLLGVFIYFRRFRKKIQKDELPRDSSALFAQHGKDEASRSSANETLGPGGPAAITGIKVDNSVVFTYEELATATDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGSREPLPWATRVQIALDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTNDSAVDSKGLVALFDGVFGQPDPTEDLCKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDEWDVGSFYENQNLVNLMSGR* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun372g00003 405 Gene3D Transferase(Phosphotransferase) domain 1 176 397 - -
Phacun372g00003 405 ProSiteProfiles Protein kinase domain profile. 105 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun372g00003 405 Pfam Protein tyrosine and serine/threonine kinase 107 376 IPR001245 GO:0004672|GO:0006468
Phacun372g00003 405 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 391 IPR044812 GO:0019199|GO:0045087
Phacun372g00003 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Phacun372g00003 405 ProSitePatterns Protein kinases ATP-binding region signature. 111 133 IPR017441 GO:0005524
Phacun372g00003 405 FunFam PTI1-like tyrosine-protein kinase 3 176 391 - -
Phacun372g00003 405 SUPERFAMILY Protein kinase-like (PK-like) 87 377 IPR011009 -
Phacun372g00003 405 CDD STKc_IRAK 111 374 - -
Phacun372g00003 405 FunFam LysM receptor kinase 2 84 175 - -
Phacun372g00003 405 Gene3D Phosphorylase Kinase; domain 1 91 175 - -
Phacun372g00003 405 SMART serkin_6 105 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun372g00003 11 405 Receptor kinase-like Gene Family AT3G21630 65.578 2.70e-174 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phacun372g00003 PK_Tyr_Ser-Thr 6.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun372g00003 K13429 - gmx:100777781 697.582