Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun321g00001 ATGGAGGACTTCTTTTTTTCTATCGCAACAAAGATTGCAGAATATGCAATAGTTCCAATTTTAGACCATGCTAAATATTTGTGTTGTTTACACAACTTTGCTTTGAATCTTCCAAATGCCAAAGAACAACTGGAATTGACTCGAGAGAGTGTGAATGAGCAAATTAGAGAAGCCACTAATAGGATTGAAAAAGTTAATCCAGCTGTTGAGGAATGGCTAAAAGATGTCAAGAAAGTCTTAGATGAAGTAAAACTGTTGGAAGAGAGAATATTGAATGTAAACAAGAGTTTTTTGAGAAGGCAATGTCAATATTCTCTTGCAAAAACTATAGCAAGAAAAACAACTAAAATGAATCAACTCCATCGTGATAGCAAGTTTGAACCGTTTTCTACAACTATTGAACTTCCAGGCATGAAGTACTATTCTTCCAATGATTTCATTATGTTCAAATCTACAGAAACATCGTACAACAAGCTTATAGAAACATTAAAGAATAAAAGTGTTTCCATGATTGGGTTAGTTGGATTAGGAGGCTCAGGGAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAGGCTGAAGAGATGAAACTCTTTGAGAAGGTTGTCATGGCAACGGTGTCTCAACCACCAAATATCATAAGTATCCAAGATCAAATTGTAGACCAATTGAGTTTCCCGTTAAATAAAGCATCAGATATAGGTAGAGCACAAAGACTATCACAGAGATTAAGAGAAGGTACAACTCTTTTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAAGCTGCAAGACTTGTTGCGTACTCATAACAACTCGCAATAAAGAAGTATGCACTTCTATGCAATGTCAAAGTATAATTGAACTTAATCTCTTGAATGACAATGAAGCATGGACTTTGTTCAGAAAATATGCAAATTTAACTGATAGCTCCTCGGAAGATTTGAAAGGTGTGGGAAGAAAAATTATTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACGGTCGCAAGCACGCTAAAGGAGAAAACTATTGAAGGTTTTGAGTTAGCGTTGTCAAGGCTAGAAAATTCTAAGCCACTAGATATTCCAAAAGGCTTAATAAGTCCTTATGTTTGTCTTGAATTAAGTTACGATAATTTGACAAACCAATTGGCTCAATCTTTATTGTTGTTGTGTTCTATGTTTCCAGAGGATTATGAAATAGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTTTGCACAGTTGGGACGTTTGGAACAATGGAGAATGCAAGGAGAGAGATGCATGAAGCCATTGACATTCTTAAGAGTTGTTTTTTGTTAATGCAAGCCGAAACAAAAAAAAATGTAAAAATGCATGATTTGGTTCGTGATGTGGCCTTGTGGATTGCCGCTAAAAGTGGTCAAGCAATTTTCACACGTAATGAAGTGGGTTTGGAAGTGTTGACAAATGATGAAATCATGACAGATACGAAAGCATTAGCCTTATGGAATATAAGAGCATATGATTCTCTTAATTATAAAATAAATTGTACAACACTTGAAATTCTCTTACTTTGTTATAGAGGTTGCGTAAATGTACCAGATGTGTGTTCTCAAAGCTTGGAAAAACTTAAAACCTTAGCAATCATAAATCCACCGTGGAGATCTAGGCTTCTTTTGCCAGAGTTACTGAATTCGTTAAAAAATCTTCGAACACTATGCTTAAGAAATCATGATTTAGGTGACATATCTTTTGTGGAAAGACTGCAAGCACTTGAGATTCTTGACTTGCATGGCTCTTCTTTTGAAGAATTTCCTGTTGGGATTGTAGAATTAAAGAAGTTGAAGCTTCTAGATTTGTTCGAATGTCCGCTTGAGAAAAATATAGGTGATGAAGTTTATGAAGTTGTGAAATGTTTGCAGCTAGAGGAATTGTATTTGTACTTGGTCAATTACAAAAAGGACTTTTTACATGATGTCTCTTTCTCCAAATTACAGAGGTATGCTATAATAAACTATCATTCTTTTAGTTATTTGGATGTCCCAACCCTGAAGAAATATGCACAGTCTAGAGGTTTATTAATACATGATTTTGATGTTACTGTTCAAAATTTTTTATCATTATCAATCAAGGATCTCTTTATAAGAGCAGAGTTCCTTCATTTGAGGAACCTTCGAGGAGATTTTAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCACTTGATTACCCTAAAACTCGAATGGTGTGAAAAGATAGAATGTCTCATTGATAACACTATGAATATCAGCAACAATGTATTCTCTAAAATTGTTTACTTAAGGTTGGAAAGTTTATGTAGCCTTCGAGAGGTTTTTTGTGATCCCTCTTCGCGATGTTCCCTCGAAAATTTAGGAGAGCTCTTGATAGAAGATTGTAGTAAATTGAACAAAATATCCTTTCCAAGGAAGTCTAAGTTATGCAATCTGAAGATCCTTTCAGTATCAAAATGCCCTGTGCTAACTTCTCTCTTCGTGCCATCTGTTGCCCAATCTCTTGTGTTGTTAGAGGAACTAAAAATATCTCACTGCAACGCATTGAGGCACATAATAGAAGAAGGGAACGATGTTCTTTCAACCACCCCAAATCACTCATATTTGACGCTCCAAAAATTAAGGATTATTGAAATTGAAATATGCGACAATTTGGAGTACATATTCTCTGAGAATTTAGCCGTAGGGCTAGTGAGTTTGGAAAGTATGGAAATTCGAAGATGCTCGGAATTGAAGTATGTATTTAACAGTGGAAAGGAACGTAATCATGCAGTTTTCCCAAGTGAAAAGGCGACTAATATCATAAATTTTCCAAATTTGCATACTTTATATTTGAAAGATTTACCAAATGTGATTGACATTTGGCCTGAATATTGTCGTCCACAACTCCCCAATATTAAAAGTATAGAGTGCAAGAATTGTCCCCAATTGCTTGACTCTTCCATAAGTAAGATGATGACTGCTTCAAATCTCCCGCAAGAAACAACTTCAAAGGAGAATGAAATACCATGCTTCATTACCAACACATTAAACCAATTGAACGCTCTGATGTTTCCACTCCAACTTGAAACCCTTTGGTTGACTGATCTTAGAGTAAAAGGTCTGTTCCAAATCCAAATGGGAGAAGAAGGGGGTAGTGGAGAACTGCTTCCTCTAAACTTGGATTGTCTATACTTGAGCAACCTTCCTGAGCTAAACTTCATATGGAAGGGCCCCACAGGTTTTCTAAGCCTCCAAATGCTCCGCTATGTTAATGTGGATGGATGTTCAAAATTGAAAATCATCTTCTCCACCACTGTTGTTACGAGTTTACCAATGTTGACGTTTCTGTATATAAGTTACTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACGACAACTCCAAACCCTGTATTCTTCCCAACAACTCTGCTTCATATGGAAGGGCCCCACAGGTTTTCTAAGCCTGCAAAACCTTGAAACTGTTAGCATAAATGGATGTCCAAAATTGAAAATCATCTTCTCCATCACTGTTGTTACAAGTTTACCAATGTTGGAAAAACTGTCGACAACTACATGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACGACAACTCCAAACCCTGGATTCTTCCCAACAAATCTGCTTCCCAAAACTCAAATCCATTAGAGTTAAAGGGTGCAATAAGTTGAAATGTCTTTTTTATAATCTATCGGCTAGTCATTTTCCGAGTCTGGAAACTTTGGAAATAGAAGAGTGCTCTCAGTTACACAAGGCTTTTGGTTTTGAAAATGAAGCTGATGATGGTGGCGGAGAAAAGACGGGTAAAAATGGAGAACAAGTTATACTACAGGAACCGAGAGAAATAAGCCTAAAAAAATTGCCAAACTTCGTAGAGATTCACCACGGATTTAAGTTAAAAGAATATCTTTACTGTCATATCGTGGAGGAATGTCCTAAGTATTCTCAAAGTTTATATCTAGATCCAGATATGTAA 4047 0.359 MEDFFFSIATKIAEYAIVPILDHAKYLCCLHNFALNLPNAKEQLELTRESVNEQIREATNRIEKVNPAVEEWLKDVKKVLDEVKLLEERILNVNKSFLRRQCQYSLAKTIARKTTKMNQLHRDSKFEPFSTTIELPGMKYYSSNDFIMFKSTETSYNKLIETLKNKSVSMIGLVGLGGSGKTTLAKEVGKKAEEMKLFEKVVMATVSQPPNIISIQDQIVDQLSFPLNKASDIGRAQRLSQRLREGTTLLILDDVWEKLNFEALGIPFDESCKTCCVLITTRNKEVCTSMQCQSIIELNLLNDNEAWTLFRKYANLTDSSSEDLKGVGRKIINECKGLPIAIVTVASTLKEKTIEGFELALSRLENSKPLDIPKGLISPYVCLELSYDNLTNQLAQSLLLLCSMFPEDYEIDLEDLFRFGRGFCTVGTFGTMENARREMHEAIDILKSCFLLMQAETKKNVKMHDLVRDVALWIAAKSGQAIFTRNEVGLEVLTNDEIMTDTKALALWNIRAYDSLNYKINCTTLEILLLCYRGCVNVPDVCSQSLEKLKTLAIINPPWRSRLLLPELLNSLKNLRTLCLRNHDLGDISFVERLQALEILDLHGSSFEEFPVGIVELKKLKLLDLFECPLEKNIGDEVYEVVKCLQLEELYLYLVNYKKDFLHDVSFSKLQRYAIINYHSFSYLDVPTLKKYAQSRGLLIHDFDVTVQNFLSLSIKDLFIRAEFLHLRNLRGDFKNIIPSMDPQGMNHLITLKLEWCEKIECLIDNTMNISNNVFSKIVYLRLESLCSLREVFCDPSSRCSLENLGELLIEDCSKLNKISFPRKSKLCNLKILSVSKCPVLTSLFVPSVAQSLVLLEELKISHCNALRHIIEEGNDVLSTTPNHSYLTLQKLRIIEIEICDNLEYIFSENLAVGLVSLESMEIRRCSELKYVFNSGKERNHAVFPSEKATNIINFPNLHTLYLKDLPNVIDIWPEYCRPQLPNIKSIECKNCPQLLDSSISKMMTASNLPQETTSKENEIPCFITNTLNQLNALMFPLQLETLWLTDLRVKGLFQIQMGEEGGSGELLPLNLDCLYLSNLPELNFIWKGPTGFLSLQMLRYVNVDGCSKLKIIFSTTVVTSLPMLTFLYISYCDELEQIFDLGDARQLQTLYSSQQLCFIWKGPTGFLSLQNLETVSINGCPKLKIIFSITVVTSLPMLEKLSTTTCDELEQIFDLGDARQLQTLDSSQQICFPKLKSIRVKGCNKLKCLFYNLSASHFPSLETLEIEECSQLHKAFGFENEADDGGGEKTGKNGEQVILQEPREISLKKLPNFVEIHHGFKLKEYLYCHIVEECPKYSQSLYLDPDM* 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun321g00001 1348 Coils Coil 41 61 - -
Phacun321g00001 1348 Gene3D Ribonuclease Inhibitor 1071 1278 IPR032675 -
Phacun321g00001 1348 Gene3D Ribonuclease Inhibitor 875 1020 IPR032675 -
Phacun321g00001 1348 Pfam NB-ARC domain 153 368 IPR002182 GO:0043531
Phacun321g00001 1348 PRINTS Disease resistance protein signature 615 631 - -
Phacun321g00001 1348 PRINTS Disease resistance protein signature 335 349 - -
Phacun321g00001 1348 PRINTS Disease resistance protein signature 170 185 - -
Phacun321g00001 1348 PRINTS Disease resistance protein signature 242 256 - -
Phacun321g00001 1348 FunFam Probable disease resistance protein At1g61300 139 294 - -
Phacun321g00001 1348 SUPERFAMILY L domain-like 462 790 - -
Phacun321g00001 1348 SUPERFAMILY RNI-like 744 995 - -
Phacun321g00001 1348 Gene3D - 142 298 IPR027417 -
Phacun321g00001 1348 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1125 1276 - -
Phacun321g00001 1348 SUPERFAMILY RNI-like 1075 1272 - -
Phacun321g00001 1348 Gene3D - 387 472 IPR036388 -
Phacun321g00001 1348 Gene3D Ribonuclease Inhibitor 520 874 IPR032675 -
Phacun321g00001 1348 Coils Coil 69 96 - -
Phacun321g00001 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 399 IPR027417 -
Phacun321g00001 1348 Gene3D - 300 386 IPR042197 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun321g00001 156 488 WRKY Transcription Factor Family AT5G45050 24.854 2.84e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun321g00001 - - pvu:PHAVU_008G245200g 1705.26