Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun250g00055 ATGTTTTGTTTTCGACAGGTATGTAGCATTGTTTTTGTAGATTTGCCTTTTGGAACAGGCTTCTCGTATGCAACAAATCCCACTGCTCATAGGAAGGACTGGAAATTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCAGAATTTCTTTCAAATGACTTTTACTTGGGAGCTGATTCATATTCTGGCATACCTGGCCCTGCCATTGTTCAAGAAATTTCAAAGGGAAATGAAATGGGTCTTCAACCACCAATAAATCTCCAGGGATATCTACTGGGGAACCCCCTAACAACACGAAAAGAAAAAAATGACCAAATCCCATTTTCTCATGGAATGGGGCTTATTTCTGATGAACTATATGAGTCACTGAAGAGGAATTGCAAAGGAGAATATATAGATGTAGATTCTAGAAATGAATTGTGTTCAAGAGATCTCAACTACTATGATGAGTGCCTTTCAGGAATTAACGAGTTCAACATTTTGGATCTCTATTGCAAAGATAATTTTACTAAGAAACATGAAGGTCCATGGAGAAGATCTCTGAATCAGAAGTTTGAGTCCTCTCTCAATTCTCATCTCACAGAGTTAGACACAAGATGCCAAATATATGGTTTTTTCCTTGCCACTCAATGGGCCAATGATGAGAGTGTTCGCAAAGCACTGCACATTCGAGAGGGAACAAAAGGCAAATGGGAACGTTGTTGGATTGGTGATTTTGAGTATGAGATCTCTAGCAGCTTCGAGTTTCATTTAAATCTCAGTGCTAAAGGATATCGTTCTCTAATATATAGTGGGGATCATGATGCAGTTGTTCCTTTCATGTCGACTCAAGCATGGATCAGAGCTCTAAACTACTCCATTGTAGACGATTGGAGGCCATGGCTTCTTGAAGGCCAAGTTGCAGGATACACAAGAACATACTCTAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACACACAGCTCCTGAGTACAAACCTGATGAAGGTTACGCCATGTTCAGTAGATGGATAGCCAGAAAGCCTTTGTAG 1050 0.401 MFCFRQVCSIVFVDLPFGTGFSYATNPTAHRKDWKLVHHTHQFLRKWLIDHPEFLSNDFYLGADSYSGIPGPAIVQEISKGNEMGLQPPINLQGYLLGNPLTTRKEKNDQIPFSHGMGLISDELYESLKRNCKGEYIDVDSRNELCSRDLNYYDECLSGINEFNILDLYCKDNFTKKHEGPWRRSLNQKFESSLNSHLTELDTRCQIYGFFLATQWANDESVRKALHIREGTKGKWERCWIGDFEYEISSSFEFHLNLSAKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVDDWRPWLLEGQVAGYTRTYSNQMTFATVKGSGHTAPEYKPDEGYAMFSRWIARKPL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun250g00055 349 Pfam Serine carboxypeptidase 6 345 IPR001563 GO:0004185|GO:0006508
Phacun250g00055 349 FunFam Carboxypeptidase 252 346 - -
Phacun250g00055 349 Gene3D alpha/beta hydrolase 2 348 IPR029058 -
Phacun250g00055 349 SUPERFAMILY alpha/beta-Hydrolases 6 348 IPR029058 -
Phacun250g00055 349 PRINTS Carboxypeptidase C serine protease (S10) family signature 13 23 IPR001563 GO:0004185|GO:0006508
Phacun250g00055 349 PRINTS Carboxypeptidase C serine protease (S10) family signature 47 72 IPR001563 GO:0004185|GO:0006508
Phacun250g00055 349 PRINTS Carboxypeptidase C serine protease (S10) family signature 316 329 IPR001563 GO:0004185|GO:0006508
Phacun250g00055 349 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 333 IPR001563 GO:0004185|GO:0006508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun250g00055 212 349 Calmodulin-binding Proteins AT2G22960 60.432 1.09e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun250g00055 K16296 - gmx:100780069 606.675