Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun250g00038 ATGTGGAATGCAGCTGAGTTTTTTCCGGATAAATCAGAAGTTCAATGTCTTCACAGATGGAAAAAAGTTCTTAATCCTGAACTTATTAAAGGACATTGGACAAAGGAGGAGGATGATAAAATAGTTGAATTGGTGTGTATACATGGACCTACAAAATGGTCTTTCATATCCAAGTCTTTGCCTGGTCGAATAGGAAAACAGTGCCGAGAACGATGGTGCAATCATCTTTGTCCAGACATAAAGAAGGATCCCTGGACTTTGGAGGAGGAATTAGCCCTTATGAAAGCTCATTGTATACATGGCAACAAATGGGCTGAAATAGCCAAGGTTCTTCCTGGAAGGACTGATAATGCAATAAAGAATCACTGGAATGGTTCTTTGAAAAAAAGGAAGGATTTCTATTTAGCTAATGGAAGACTTCCACCCATTCCAAAGAGCAGTACGGAAGTTACTGTCAAAGATACAGTCGCACATTCTACAACTAACACAATTCATGTTTGTTCAAATAAAGGATTAGATGCCACTGTTGCATCATCATCTAAAACTACAGATATTGCTAAGCTTGATAGCAGTGATAAGAATAAACTAAAATCCTCAGGAATAGTTAGAGAGGTTGAATATTCTTCAAGTCTTCAACCAAAAAAATGTGCTGATTCTGATTGTGTAAACTGCAATAGATTATTCCACGAAGGTCTCCGCTGTAGTAACATGGAATCAGGGTCAGGAGATAATTTTAAAATAAACAAGGCGCCAAAATTTGTGAATCCTGCCCAAAATGCTAACCCAAGAATTGATCATTACCTGAATAATAGTGATATGAACGGTGACAGATCAACCAGAATTTTTTATTCAAAGGAAAGTCGAAGGTTTGGTTCTTTTTGTTATGAATCACCACGGCTTGATAACCCACATCCTTCAGAATCTTTTAATTTTAACATCTCTGGCCTGCAGAATCAGTACTTTTCTCCACGAATGAAGTCATCTGTTGGTTTCGTGACTCCACCTCACGTGAAGGGAATTGAATCATGCTCCGAATCTCTTGAATCAATATTGAGAAAGGCAGCTAAAACCTTCCCAACTCCTTCAATAATAAGGAAGAGAAGAAATGGAAGTGAATTACCTCCCACTCCTAGAAAGCTTGCAAATGCAGTTACTTCACATGTTTGTAATGAAGAAGTGAGAACAAATGATGTTTCTTGTTCTGAAGCTGTGAGGTTACCTGTCAGTCCAGCTAACCATGGCCATGGGAGTAATATTCTCCACAATAAGGCTTTCAACATGACTCCTCTATACCGAATAAGGTCCAAGCAAACAGCTATTAAGTCTTTGAAGAAACAACTTGATTCTGCATTTTACATGGAGGAGAAACTTGCTAGTGAGATTGAAAAATCTACAAAGAGTGTTGTGATAACTGAAGATTGTCTTCATAAACCAAAATTGGCAGAGACATAG 1452 0.3795 MWNAAEFFPDKSEVQCLHRWKKVLNPELIKGHWTKEEDDKIVELVCIHGPTKWSFISKSLPGRIGKQCRERWCNHLCPDIKKDPWTLEEELALMKAHCIHGNKWAEIAKVLPGRTDNAIKNHWNGSLKKRKDFYLANGRLPPIPKSSTEVTVKDTVAHSTTNTIHVCSNKGLDATVASSSKTTDIAKLDSSDKNKLKSSGIVREVEYSSSLQPKKCADSDCVNCNRLFHEGLRCSNMESGSGDNFKINKAPKFVNPAQNANPRIDHYLNNSDMNGDRSTRIFYSKESRRFGSFCYESPRLDNPHPSESFNFNISGLQNQYFSPRMKSSVGFVTPPHVKGIESCSESLESILRKAAKTFPTPSIIRKRRNGSELPPTPRKLANAVTSHVCNEEVRTNDVSCSEAVRLPVSPANHGHGSNILHNKAFNMTPLYRIRSKQTAIKSLKKQLDSAFYMEEKLASEIEKSTKSVVITEDCLHKPKLAET* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun250g00038 483 CDD SANT 33 76 IPR001005 -
Phacun250g00038 483 SMART sant 81 129 IPR001005 -
Phacun250g00038 483 SMART sant 29 78 IPR001005 -
Phacun250g00038 483 Gene3D - 29 81 - -
Phacun250g00038 483 ProSiteProfiles Myb-like domain profile. 77 127 IPR001005 -
Phacun250g00038 483 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 80 IPR017930 -
Phacun250g00038 483 FunFam Transcriptional activator Myb isoform A 29 82 - -
Phacun250g00038 483 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 131 IPR017930 -
Phacun250g00038 483 SUPERFAMILY Homeodomain-like 27 123 IPR009057 -
Phacun250g00038 483 PANTHER MYB PROTEIN-RELATED 5 63 - -
Phacun250g00038 483 ProSiteProfiles Myb-like domain profile. 25 76 IPR001005 -
Phacun250g00038 483 Pfam Myb-like DNA-binding domain 33 91 - -
Phacun250g00038 483 CDD SANT 84 124 IPR001005 -
Phacun250g00038 483 FunFam Transcription factor MYB3R-2 83 147 - -
Phacun250g00038 483 Gene3D - 83 150 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun250g00038 3 473 MYB Transcription Factor Family AT3G09370 40.167 1.81e-91 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phacun250g00038 Myb_DNA-bind_6 6.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun250g00038 K09422 - gmx:100777236 513.842