Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun250g00037 ATGTTATCAAGTATCATCCCCTATTGCGCCATTTCTTTGACAGACTTGCATACAAGAGGGATGGTGATGAAAGAAATGGTTCAGGTTGAGAAAAGGATCACACCATGTTCTTCAGTGGCAAAAGACTCTCTAAGGAGAAAGATAAAAGAGATTGTTTTGAAAGAGATATCAAGAAAGAGGACAAGACATCATAGAAGTTCAACCTGTCCTACGTCAATCAACATGAACGAGAACTTGTTAACAACATTTGTGCAAGAACCAGTCTCTCCTTTGGTCTATCACCTCCACAAACAACATGTGTATGGCACAAAAAGGAAATTTACTAGGTCCGTTTCATTTCAGCTACCTTACTCCTCATCAAAAAGAGAAAGTTTTGGGTCTATAGGCAACGGTTTTTTAACAGAAGAGAAAGGAAAATTGTGTTATGAAAACAAAACACCAAAGTCACGTCAATTTGAATCCTCAAAAAATTTTTACCTAAGGTCCTTGTCATTAGGAGCAACATGTTTCAATGTAAATGAAGCAACTATTGCAAGAGATGCTACTAATTCTTCAGGGTCTGCTCAGGATCAGATCCATAACGAAATCAAACATTTTAAGAATCTGAAACAGAAAATAGAGCATGTTACAGGAGAAAGTAGGAAAGAAAAGCTTCGCGTTACTATGGATGCTATCGTTCACAAACTTCCTCAAGGCCATGGAATGCCAAATGATTTGAAGAAGGAATTTGTTAAGAAATTGACAGATTCTAATATGATCAGATGCAATGAGAGTGGTCACCTCACTCCTTCATTCGCCAAGCATCACAGCAACAGCATAAGTAGAAAATTGTCTCTTCAAGAACCACTAGAAATTTATTTTCGTTCCCATGAGAGTGGCTTTAATCCAGAACCAAGTCACGTCCAATCTAAGAAACTGAAATTAAGAACAGAAAAAGGGCATTCACCATTGAAGATGATGATACGCTTACAAAGGATGCTTTCATTGCCTGATCTCCAATCCTTTTCCTATGGTTTTCAGAATGGGGAGTTCCCTGATATTTCATCTTTAACTTTGCCAAAGCCAAAAGTAGCTTCTGGGGATGGAACATTGAGTTCTGAGAACATTGTTCATCAGAAAAAGAAGCTTGACCTTCATTTGCATTCAAAAACTCAGCTTCAATTGGATACACCAGTAGAAAAATTGATTCAGAAACACCTTGGCAGTGTGGATGAAAATGATCTACTGATTAGTAATATTGTTGAACAAGGATCAGACTGTAGCAAGGTGGGCATGACAACTGATGATTTTGGACATAGTTCTTTCAAAAGTGGTGACACCTTTAATGATCAAGAAATGATTGAGCCAATAAAACAAAGCATGACTGCAATAGAAGAATCAGTGAATCCAAAATTGATTACTGAACCCGACAATGGACTAGAAAACATTATTGAGCAACAAGAAGCTATAATGGATTCCCTTAAAGTGAAAGACAGCACAGAGAATGCTCAAAAAGTGGAGATCCAAAGCAAGCAGTTGATGAACTATGACATTCTTCCTGTATCTCATATCCCCACAAGAGACAAAGCTGAGTTTAATTATGTGAAATATGTACTTGAGATATGTGGACTGACTGGTAAAGAGTGCCTTTCAGCATGGCATTCAAGTAACCACCCAGTTGATCCATTGCTCTATGAAGAAATGGAGAGTGACCTTGATTTCTGCAGTTATGGGGGCAGTGGCCAGTGTAATCACCATGTATTGTTTGACTTAATCAATGAGTCATTGTTGGAACTTTCTGGGAGGTCTTACTGCTACTGTTCCATTCCACTTTCACCATCTCATCCAATGCCAAAAGGGTTTCACAATCTTCATCAAGTGTGGACTCATATGAACAAGTCCTTGTGCCTCAGATCCAAAACTGGCCTAACAATAGATGATCATGTAAGTCGTGACCTAGAAAGGCGTGATGGGTGGGTGAACCCTCAAATATTTGCACAGTGTGTCAGTTTGGAGCTTGAAGAACTGATTTTGCAAGATCTTGTGGAGGAAATGTCAAGTGACTTAGCATGCATTTAA 2058 0.3858 MLSSIIPYCAISLTDLHTRGMVMKEMVQVEKRITPCSSVAKDSLRRKIKEIVLKEISRKRTRHHRSSTCPTSINMNENLLTTFVQEPVSPLVYHLHKQHVYGTKRKFTRSVSFQLPYSSSKRESFGSIGNGFLTEEKGKLCYENKTPKSRQFESSKNFYLRSLSLGATCFNVNEATIARDATNSSGSAQDQIHNEIKHFKNLKQKIEHVTGESRKEKLRVTMDAIVHKLPQGHGMPNDLKKEFVKKLTDSNMIRCNESGHLTPSFAKHHSNSISRKLSLQEPLEIYFRSHESGFNPEPSHVQSKKLKLRTEKGHSPLKMMIRLQRMLSLPDLQSFSYGFQNGEFPDISSLTLPKPKVASGDGTLSSENIVHQKKKLDLHLHSKTQLQLDTPVEKLIQKHLGSVDENDLLISNIVEQGSDCSKVGMTTDDFGHSSFKSGDTFNDQEMIEPIKQSMTAIEESVNPKLITEPDNGLENIIEQQEAIMDSLKVKDSTENAQKVEIQSKQLMNYDILPVSHIPTRDKAEFNYVKYVLEICGLTGKECLSAWHSSNHPVDPLLYEEMESDLDFCSYGGSGQCNHHVLFDLINESLLELSGRSYCYCSIPLSPSHPMPKGFHNLHQVWTHMNKSLCLRSKTGLTIDDHVSRDLERRDGWVNPQIFAQCVSLELEELILQDLVEEMSSDLACI* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun250g00037 685 Pfam Domain of unknown function (DUF4378) 524 677 IPR025486 -
Phacun250g00037 685 PANTHER PROTEIN TRM32 73 681 IPR044257 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun250g00037 514 671 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 41.618 9.69e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun250g00037 - - pvu:PHAVU_010G012600g 912.138