Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun250g00035 ATGCTTCTTGTTTTCAGTGGTTATGCTTTGGCAGTGTGGTTTGGTGCAAAGATGATAATGGAAAATGAAAAAAAATATAATGGGGGCACGGTGCTCAATGTGATTGCTTCTTTATTAACAGCTTCAATGTCTCTTGGGGAGGCATCCCCTATCATGAGTGCATTTGCTGCAGGTCAAGCTGCTGCTTACAAAATGTTTGAAGCAATTGCGAGGAAGCCTGAGATAGATGCTTATGACCCAAATGGAAAAATATTAGAGGATATTGAAGGTGAAATAGAGTTGAGGGATGTTTGTTTCAGTTATCCAACGAGGCCTGAGGAGTTGATACTCAATAGGTTCTCTCTTGATATACCTAGTGGTACAAGTGTTGCTCTTGTGGGACAAAGTGGATGTGGAAAATCCACGGTTATCAGTTTGATAGAGAGATTCTATGATCCTCAAGAAGGTGAAGTTGTTATTGATGGCATTAACCTGAAAGAGTTTCAGCTTAGTTGGATGAGGGGGAAAATTGGCCTTGTTAACCAGGAGCCAGTGTTGTTTGCATCAAGCATTATGGATAACATTGCATATGGAAAGGAGGGAGCCACAATTGAAGAGATAAGATCAGCATCTGCACTTGCAAATGCTACAAAATTCATTCATAAACTGCCACAGGGATTGAACACAATGGTTGGTGAACAAGGAACTCAACTCTCTGGTGGACAGAAGCAGCGCATTGCCATAGCGAGAGCAATCCTAAAGGATCCAAGAATTCTACTTCTGGACGAAGCTACAAGTGCCCTTGATGCAGAGTCTGAAAGGACAGTGCAAGAGGCTCTTGACAGGGTCATGGTTAACCGAACTACTGTTGTTGTGGCACATCGGTTGAGCACAGTGAGGAATGCTGATACCATTGTTGTAATTCATAGAGGGAAGGTGGTTGAAAAAGGAACACACTCAGAACTAGTCAAGGATCTGGAGGGAGCTTACTCTAAATTGATACGTTTACAACAAGTAAACAAGGAATCAGAAGAAACTACAAGCTATGACAGCAAGAGTGAAGTTTCTATGGAATCCTCTACACAGTTAACCAAAAAGATATCAATTAGGAGATCTATTAGTAGGGGATCCTCTTTGGGGAGTAGTAGCCGCCACTCATTTTCTCTTTCCTCTGGTTTACCCACGCGTGCTAGTTTCCCTGATAATGAAGGTGATGACCCTTTACTCGAAAGACAAGCACAAGAGGTTTCACTCCTCCGGCTTGCTTCCCTCAACAAACCAGAGATTCCAGTTCTTCTGATTGGATGTCTGGCTGCCATAGCAAATGGTGTTATACTTCCCATATTTGGGGTGTTGATTTCCAGTGTGGTCAAAACATTTTATGAACCAGTTGATGAGATGAAAAAGGAATCCAAATTTTGGGCACTTATGTTCGTGGTTCTTGGTGTTGCATCATTGTTGGTGATTCCAGCTCGAGCATACTTTTATTCTGTGGCTGGATGCAAGTTGATCCAACGTATCAGGGTAATATGTTTTGAGAAAGTGGTGAACATGGAGGTTGGTTGGTTTGATGAGCCAAGCAATTCAAGTGGTGCCATTAGTGCAAGGCTCTCAGCCATTGCTGCTTCTGTGCGCGCCCTTGTTGGTGATGCACTGGGGCTGTTGGTCCAAAATTTAACATGTGCCTTGGCAGGTTTGATTATTGCTTTCATTGCATGCTGGCAGTTGGCTTTGATTATTCTTGTCTTGATTCCCCTTATTGGTGCAAATGGCTATGTTCAAACGAAATTCATGATGGGGTTCACCAAAGATGCAAAGATGATGTACGAGGAAGCAAGCCAAGTTGCTAAAGATGCAGTTGAAAATATAAGAACAGTAGCTTCTTTCTGTGCTGAAGATAAGGTCATGGAATTGTATAGGAAGAAATGTGAAGACCCCATGAAAACAGGGATATGGCAAGGGTTGATCAGTGGATTAGGATTTGGGGTTTCATTTTTCTTACTATTTTGTGTCTATGCAACTAGTTTCTATGCAGGAGCTAGACTAGTGGCCGCTGGAGAAACATCATTCTCCGAAGTTTTTCGGGTTTTCTTTGCTTTAACTATGGCAGCTATTGGAGTTTCCCAGTTTAGCACAATTTCTCCTGATTCTGGCAAAGCCAAATCGGCTGCGGCTGCCATATTTGGAATAATTGATAAGAAGTCAGAGATAGATCCAAGTGACGAGACTGGTACCACATTGGATATAGTTGAGGGAGAAATTAAGCTTCACCATGTGAATTTCAAGTATCCATCAAGGCCAAATGTACAGATTTTTCGAGACCTTAACTTGGTTATCCATTCTGGCAAGACAGTGGCCCTTGTTGGTGAAAGTGGAAGTGGAAAATCAACAGTGATTGCGTTGTTGCAGAGATTTTATGTTCCCAATGCAGGTGAAATCACACTTGATGGTGTACCAATTGGGGACTTACAACTGAAGTGGTTTAGGCAGCAAATGGGTTTTGTAAGCCAAGAGCCAGTATTGTTCAATGATACTATTCGTGGTAACATTGCTTATGGGAAGGGAGGTGAAGCAACTGAAGCAGAAATCATTGCAGCTGCAAAACTAGCTAATGCCCATGTCTTTATTAGTGCCTTACAACAGGGTTATGACACTGTAGTGGGAGAAAGGGGAACCCAATTATCTGGTGGGCAGAAGCAAAGGGTAGCCATTGCCCGTGCTTTGATCAAAAGTCCAAAGATATTGCTCTTAGACGAAGCCACAAGTGCATTAGACGCTGAGTCAGAGAGAGTTGTTCAGGATGCATTGGACAAAGTGATGGTGAATAGGAGCACTGTGGTTGTGGCACATCGTCTATCTGCAATAAAAAGTGCAGATTTGATTGGTGTTGTGAAAGGTGGAGTCATAGTGGAGGAGGGAAGCCACGAAACACTGGTTAGAGTGAAGGATGGGTTTTATGCTTTCTTAGTTCAACTTCACTCAAATGCTTCAAAAACTAGAGTTCTATGA 2988 0.425 MLLVFSGYALAVWFGAKMIMENEKKYNGGTVLNVIASLLTASMSLGEASPIMSAFAAGQAAAYKMFEAIARKPEIDAYDPNGKILEDIEGEIELRDVCFSYPTRPEELILNRFSLDIPSGTSVALVGQSGCGKSTVISLIERFYDPQEGEVVIDGINLKEFQLSWMRGKIGLVNQEPVLFASSIMDNIAYGKEGATIEEIRSASALANATKFIHKLPQGLNTMVGEQGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERTVQEALDRVMVNRTTVVVAHRLSTVRNADTIVVIHRGKVVEKGTHSELVKDLEGAYSKLIRLQQVNKESEETTSYDSKSEVSMESSTQLTKKISIRRSISRGSSLGSSSRHSFSLSSGLPTRASFPDNEGDDPLLERQAQEVSLLRLASLNKPEIPVLLIGCLAAIANGVILPIFGVLISSVVKTFYEPVDEMKKESKFWALMFVVLGVASLLVIPARAYFYSVAGCKLIQRIRVICFEKVVNMEVGWFDEPSNSSGAISARLSAIAASVRALVGDALGLLVQNLTCALAGLIIAFIACWQLALIILVLIPLIGANGYVQTKFMMGFTKDAKMMYEEASQVAKDAVENIRTVASFCAEDKVMELYRKKCEDPMKTGIWQGLISGLGFGVSFFLLFCVYATSFYAGARLVAAGETSFSEVFRVFFALTMAAIGVSQFSTISPDSGKAKSAAAAIFGIIDKKSEIDPSDETGTTLDIVEGEIKLHHVNFKYPSRPNVQIFRDLNLVIHSGKTVALVGESGSGKSTVIALLQRFYVPNAGEITLDGVPIGDLQLKWFRQQMGFVSQEPVLFNDTIRGNIAYGKGGEATEAEIIAAAKLANAHVFISALQQGYDTVVGERGTQLSGGQKQRVAIARALIKSPKILLLDEATSALDAESERVVQDALDKVMVNRSTVVVAHRLSAIKSADLIGVVKGGVIVEEGSHETLVRVKDGFYAFLVQLHSNASKTRVL* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun250g00035 995 Pfam ABC transporter transmembrane region 425 697 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phacun250g00035 995 CDD ABC_MTABC3_MDL1_MDL2 92 330 - -
Phacun250g00035 995 SMART AAA_5 119 305 IPR003593 GO:0016887
Phacun250g00035 995 SMART AAA_5 774 968 IPR003593 GO:0016887
Phacun250g00035 995 Gene3D - 82 331 IPR027417 -
Phacun250g00035 995 Gene3D - 737 987 IPR027417 -
Phacun250g00035 995 Pfam ABC transporter 766 915 IPR003439 GO:0005524
Phacun250g00035 995 SUPERFAMILY ABC transporter transmembrane region 413 732 IPR036640 GO:0005524|GO:0016020
Phacun250g00035 995 Pfam ABC transporter 110 259 IPR003439 GO:0005524
Phacun250g00035 995 CDD ABC_MTABC3_MDL1_MDL2 747 985 - -
Phacun250g00035 995 ProSitePatterns ABC transporters family signature. 887 901 IPR017871 GO:0005524|GO:0016887
Phacun250g00035 995 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 57 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phacun250g00035 995 FunFam ABC transporter B family member 1 82 331 - -
Phacun250g00035 995 FunFam ABC transporter B family member 1 405 713 - -
Phacun250g00035 995 MobiDBLite consensus disorder prediction 368 398 - -
Phacun250g00035 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 738 983 IPR027417 -
Phacun250g00035 995 SUPERFAMILY ABC transporter transmembrane region 2 76 IPR036640 GO:0005524|GO:0016020
Phacun250g00035 995 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 92 328 IPR003439 GO:0005524
Phacun250g00035 995 Gene3D ABC transporter type 1, transmembrane domain 405 713 IPR036640 GO:0005524|GO:0016020
Phacun250g00035 995 MobiDBLite consensus disorder prediction 368 390 - -
Phacun250g00035 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 330 IPR027417 -
Phacun250g00035 995 Gene3D ABC transporter type 1, transmembrane domain 714 991 IPR036640 GO:0005524|GO:0016020
Phacun250g00035 995 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 747 984 IPR003439 GO:0005524
Phacun250g00035 995 FunFam ABC transporter B family member 1 737 987 - -
Phacun250g00035 995 Gene3D ABC transporter type 1, transmembrane domain 2 351 IPR036640 GO:0005524|GO:0016020
Phacun250g00035 995 CDD ABC_6TM_Pgp_ABCB1_D2_like 415 730 - -
Phacun250g00035 995 PANTHER ABC TRANSPORTER B FAMILY 405 985 IPR039421 -
Phacun250g00035 995 ProSitePatterns ABC transporters family signature. 231 245 IPR017871 GO:0005524|GO:0016887
Phacun250g00035 995 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 426 712 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun250g00035 427 992 Calmodulin-binding Proteins AT2G36910 39.649 9.52e-125 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun250g00035 K05658 - gmx:100800034 1462.59