Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun250g00027 ATGGTTTTTACTTCCATACCAGCTTCTTATTTTGATGCAGCCAACTGGCAGCAACAGCAACCAAATAGCCAAGGCGGAGGCACTGGTTCCACCTCTCGGCAGCTTCTTCCACCACCGCCACAGCCACAGCCACCGCTTCCGGGTGCAATGCAGTCTCATGGAGAGGGCTCAATCAGGCCAGGATCCATGGCTGATAGGGCAAGGATGGCCAACATGCCAATGCCAGAGGTTGCACTCAAGTGTCCACGCTGCGAATCAACCAACACTAAATTTTGCTACTTCAACAACTACAGTCTCTCCCAGCCCCGCCACTTCTGCAAGACCTGCAGAAGGTACTGGACCAGAGGTGGCGCCCTGAGGAGCGTCCCCGTCGGCGGAGGCTGCAGGAGGAACAAGCGGAGTAAAGGAGGCGGCGGCTCCAACTCTCCGGCAAGCTCTGACCGCCAGACAGGAAGTGTCAACTCCACCAACTCGGTATCTTCCAAGAGTGAGAGAATAGGGCTTGCACCCCACCTTCCACCGCTCAGATTCATGCCTCCATTGCATCAACTTGCTGAGTTTGGAGATGGAGATATTGGCCTAAACTATGGCCTCAGTTATGGCCCAGTGGGAGGAGTTGGGGACTTGAGTTATCAAATTGGAGCAAGTGCTTTTGGTGGTGCCACTTCAATCTTGTCTGCACCTGGTTTGGACCAATGGAGAATGCCACAGCAGTTTCCCCTCCTTGCTTCCTTGGAAGCTTCATCACCAGCTTCTAATTTATACCCTTTTGAAGGCAATGCTGAGGTGAGTGGATATATGAGGCCAAAGGTTTCAACTTCTGGGATCATGACTCAGCTAGCTTCAGTCAAAATGGAAGAGGGTAGGGAACCTAACTTGCCAACCCATTTCTTGGGAAACAATAATCCAGTGAGTGAACAGTTTTGGACCAGTGCTACTTCTGCATCTTGGACTGATATTTCTGGCTTTAGCTCTTCTTCAACTACTAGCAACCATCTATAG 1002 0.513 MVFTSIPASYFDAANWQQQQPNSQGGGTGSTSRQLLPPPPQPQPPLPGAMQSHGEGSIRPGSMADRARMANMPMPEVALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKGGGGSNSPASSDRQTGSVNSTNSVSSKSERIGLAPHLPPLRFMPPLHQLAEFGDGDIGLNYGLSYGPVGGVGDLSYQIGASAFGGATSILSAPGLDQWRMPQQFPLLASLEASSPASNLYPFEGNAEVSGYMRPKVSTSGIMTQLASVKMEEGREPNLPTHFLGNNNPVSEQFWTSATSASWTDISGFSSSSTTSNHL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun250g00027 333 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Phacun250g00027 333 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 51 170 IPR045174 GO:0003700|GO:0006355
Phacun250g00027 333 MobiDBLite consensus disorder prediction 135 164 - -
Phacun250g00027 333 MobiDBLite consensus disorder prediction 14 34 - -
Phacun250g00027 333 Pfam Dof domain, zinc finger 78 133 IPR003851 GO:0003677|GO:0006355
Phacun250g00027 333 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Phacun250g00027 333 MobiDBLite consensus disorder prediction 14 62 - -
Phacun250g00027 333 MobiDBLite consensus disorder prediction 123 165 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun250g00027 33 329 C2C2-Dof Transcription Factor Family AT3G55370 41.433 9.20e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phacun250g00027 zf-Dof 6.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun250g00027 - - pvu:PHAVU_010G013500g 569.696