Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun250g00004 ATGGCACAGGCAGTGGGGCGGAGCAGGGTGGTCGGAGAATACGTGGTGGGGAGGCAAATCGGCTCGGGGTCGTTCTCGGTGGTGTGGCACGGAAGGCACAAGGTTCACGGAACCGAGGTTGCAATAAAGGAGATCGCCACACTTCGCCTCAATAAAAAGTTGCAGGAGAGCCTCATGTCCGAGATTTTCATCTTGAAGCGGATTAACCACCCTAACATAATCTGTTTGCACGATATCATTCAGGTTCCTGGGAAGATACATCTTGTGTTAGAATACTGTAAAGGGGGAGATCTTTCCTTGTACATTCAACGCCATGGAAGGGTACCAGAGGCAACTGCAAAGCATTTTATGCAGCAGCTGGCTGCTGGTCTACTAGTTCTTCGAGATAATAACCTTATTCATCGAGACCTGAAACCACAGAACCTTCTTCTCTCCCAAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAGGGGCCTTGCTGAAACCTTGTGTGGTTCACCACTGTACATGGCTCCTGAAATCATGCAACTACAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTGGTTACAGGAAGAACACCTTTTACCGGAAGCAATCAAATACAGTTACTACAGAATATTTTGAAATCGACAGAATTGCAGTTTCCATCTGATAGCCCAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAATTGCTACGTCGGAATCCAGTGGAACGTCTAACTTTTGAAGAATTTTTTAACCACCCATTTCTTTCTCAGAAGCAAAGAGAACAGGATGATGAGCCATTGAGGAGTAGAAGTTCTTCAAGGCTGGTTGGTGGGTTTTATTCTACCGTGTCTGACCCTTTGAGAAGAACTGACGAAAATTATCAAGAAGATTGTTTGCCTTTCATCCTAGATGACGACTCTGGTGGCCCTGAGGGGAGTCCATCCTTTTCAAGAAAAAAACCCTCAATAAAGTCCACCTATGGATTTGATCTAAATTCTAAACTAGATAAAGCAGATTCAACATCTCCTATGTATAATAACATAAATTCTAATTCTGGATTTGTTAGTGTGACACAAAGATCTGATAACACTAATAGAAGATTGGACAACCATAACATTTCAAGAAATCTCACTGATCCTCTAGAATCTCCAGAACAGATGTTCGCAAATCCTTATCCAAAAGTTACGGATTCCCTGGAGAATATTGATCAAGAATATGTTCTGGTGCCAGGGCTCCCTGATGTTTCGTCATCTTCAGTGGGTGCTTCACGGCCCAGCCATACTCCATATAGGTCTGGTAGTTTACCCCAAGAGTCTTCTAGTTCAATCACCAGACCTAGTGCTCCAATGCCAATAGTTGGTGTACATACAAATAGCATGTACCAAGTTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACTTCGCTTGGATCAATGGATATAGGTGATGAACAGCCATCAGCTCACTGCATGACTAGGGTGAAATCATTGCAACAGTGTGCATCTGCCATCACTGAGTTAGTTAATGAAAAGATGGAGGCAGGAAAGCATCTAGAGGCATTTTCTATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCGCTGCACATATGCCATACACAAGCTGCCTCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGAAAGGGTGCCAGTAGGAAGCATGGCAGTCCTGATTCGGAAGAATGCCTTGATGGAAACATCCTAGAGCCAAAGGATATATTATCCAAAATTGAAAGTGATTTTTTGAGGGAATATGAGCACGCTGAAGAACTTGCTAAGACCATTGAGCCTGGAAACACTGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCCCTTGCTTTTGGAAGGCATGGGGGTGTAGAAGAACTCATGGGTGACATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTTCGTCTGTTAGTTTTCCTTCTAGTGGAAGGACCATCCCTTATTCTTAATCCTCCGTTTTCACTGACAAACTCAGATCGTTACAGACTTCGAAATTACATTGATATTCTTAATAACAGACAAGGTTATTCAAGGTCCCAGCGAATGGCACTGCTGAAATGTGATGACAGTCAAGGTATCCTTAAGGAAAAATTTTAG 2199 0.4311 MAQAVGRSRVVGEYVVGRQIGSGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIICLHDIIQVPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMQQLAAGLLVLRDNNLIHRDLKPQNLLLSQNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGSNQIQLLQNILKSTELQFPSDSPSLSFECKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQREQDDEPLRSRSSSRLVGGFYSTVSDPLRRTDENYQEDCLPFILDDDSGGPEGSPSFSRKKPSIKSTYGFDLNSKLDKADSTSPMYNNINSNSGFVSVTQRSDNTNRRLDNHNISRNLTDPLESPEQMFANPYPKVTDSLENIDQEYVLVPGLPDVSSSSVGASRPSHTPYRSGSLPQESSSSITRPSAPMPIVGVHTNSMYQVGSSGSQDSAPGTSLGSMDIGDEQPSAHCMTRVKSLQQCASAITELVNEKMEAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRKGASRKHGSPDSEECLDGNILEPKDILSKIESDFLREYEHAEELAKTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGDMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMALLKCDDSQGILKEKF* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun250g00004 732 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun250g00004 732 Pfam Protein kinase domain 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun250g00004 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Phacun250g00004 732 FunFam Serine/threonine-protein kinase ATG1 6 313 - -
Phacun250g00004 732 MobiDBLite consensus disorder prediction 432 463 - -
Phacun250g00004 732 Gene3D Transferase(Phosphotransferase) domain 1 6 310 - -
Phacun250g00004 732 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 3 641 IPR045269 GO:0004674|GO:0006914
Phacun250g00004 732 CDD STKc_ATG1_ULK_like 20 270 - -
Phacun250g00004 732 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun250g00004 732 SUPERFAMILY Protein kinase-like (PK-like) 10 460 IPR011009 -
Phacun250g00004 732 MobiDBLite consensus disorder prediction 380 402 - -
Phacun250g00004 732 MobiDBLite consensus disorder prediction 574 592 - -
Phacun250g00004 732 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Phacun250g00004 732 FunFam Aurora kinase A 7 96 - -
Phacun250g00004 732 MobiDBLite consensus disorder prediction 480 502 - -
Phacun250g00004 732 MobiDBLite consensus disorder prediction 431 464 - -
Phacun250g00004 732 MobiDBLite consensus disorder prediction 560 592 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun250g00004 10 281 CBL-interacting serine-threonine protein kinases AT2G30360 36.879 4.49e-53 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Phacun250g00004 Pkinase 7.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun250g00004 K08269 - gmx:100791596 1293.49