Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun238g00073 ATGAAGCTGAATCCCCTCTGCATAGTTTTACCACCAAATTCTGGTGAAATGGTGCTGCCACTCGAAAAGGGTGTCCAACAAGAACCCTTTCAAACACCAAAGAAACAAGTTGAGGCCAAACAGCCTCACAGGGCATGTGGGGGGCATGTTCTTGCTTCTCTTGGCGATTTTTTGGGCAAGTTGTATGACTCAGGGTGGTGGAGAATTTGCCAGAAAGGAGAGCACAAAGAGAAGCACAACTCTGGTGTGTTGTTTCATGATATGGACGGTGTGCAAGTTTCTGTCAACATTGGCAGGGACAACCCCAGAATTTTCAGCTATGCAGAGCTGTTCATAGGGTCCAATGGTTTCAGTGAAGACCAAGTTTTAGGGAGTGGAGGGTTTGGCAAAGTGTACAAGGCTGTTCTGCCCAGTGATGGAACCGTGGTTGCTGTGAAGTGCTGTTTGGCAGGGAAAGGCAAGCAGTTTGAGAAAAGTTTTGCAGCAGAGTTAACAGCTGTAGCTGATCTTCGCCACAAGAATCTTGTGAGGCTGAGGGGTTGGTGTGTCAATGAAGATCAGTTGCATCTTGTTTATGACTACATGCCAAACCGAAGCCTTGACCGTGTACTATTTCGCAGGCACGAGAACTTGAAGGCTAAGCCTCTTCAATGGGGACAAAGAGGGAAGGTTGTGAAGGGTTTGGCAGCTGCATTGTACTATCTCCATGAGCAATTAGAGACTCAAATCATTCATAGGGATGTTAAGAGCAGCAATGTGATGCTTGATTCCCATTACAATGCTCGGTTGGGTGACTTTGGCATGGCAAGGTGGCTAGAGCATGAGCTTGAGTATAAGTATGACAACAGGAAAACAATATCAATCAGAAATGACCATTTCAGATTGGGAGAGACATCAAGAATTGGGGGCACAATTGGGTATCTTCCTCCTGAAAGCTTGCAGAAACCAAGCAATGCTACCTCCAAATCTGATGTCTTCAGTTTTGGGATTGTTGTGCTAGAGGTGGCGTCTGGAAGGAGAGCAATCGATCTTACGCAGCCAGATGAACAAATGATTTTGCTTGACTGGATTAGAAGGCTTTCTGATGAAGGGAAGCTTCTGGAAGCAGCTGATACAAGGCTACCAGATGGATCCTTCATGCTTTCAGAGATGCAGCATTTCATTCACACAGGCCTCCTCTGCACACTCCATGACCCACAATTGAGGCCAAGCATGAAATGGGTTGTGGAAGCTCTTTCTGACATTTCTTTTAAACTACCAGCACTCCCTTCTTTTCTCTCCCACCCTTTATACATCTCTTTGTCTTCCCCATCTGATACTAGTCATAGTCCAAGCAGCACAAGTGGCACTAGCTCTACCACAGATAATGCAAGCATAATCACCACCAATACCTCATCAAACTATGTCACAGCCGCAGGTGAAACTGTGTATGTAACCGCTGAGTACAAAAACAGTGAAATCATCTCTTCTAAGAGCATGAACCACCACCGACCATTTCCTGTGGTAGAAACTCCAAGAGAAATATCATACAAGGAGATTGTTTCTGCTACAGATAACTTCTCCGATTCAAGAAGGGTGGCTGAGCTAGACTTTGGAACTGCTTACCATGGCATCCTTGATGACCAATGCCATGTTTTGGTGAAACGCCTTGGGATGAAGACATGTCCAGCACTGCGTGATAGATTCTCCAATGAACTCCGAAATCTGGGACGGCTTCGCCATAGGAATTTGGTTCAACTTCGTGGATGGTGCACTGAGCAAGGAGAGATGCTTGTTATTTATGATTACTCGGCAAGTAGAATTCTCAGCCAACTGCTTATGCATCATAACAATGGAAGTAGAAGTGGGGCTTCTTTCCTCCAATGGCATCACAGGTACAACATAGTGAAAGCACTGGCCTCTGCAGTACTCTATCTACATGAGGAATGGGATGAACAAGTGATCCACAGAAACATTACCTCTTCAGCTGTCATTCTTGAACAAGATATGAATCCAAGACTCAGCTCGTTTGCTCTAGCAGAATTTTTGTCAAGGAATGAGCATGGTCATCATGTAGTTGCTGACACTAGAAAATCGGTTCGTGGGATTTTCGGCTACATGTCTCCAGAATACGTGGAATCAGGTGAAGCAACCACTGAAGCTGATGTTTATAGTTTTGGTGTAGTGGTGCTTGAAGTTGTCAGTGGACAGATGGCAGTAGATTTTAGGCAACCAGAGGTGCTTTTGGTGAAGAAGGTTCATGAATTTGAGACGAGAAAAAGACCATTGAAGGAATTAGCTGACATTAGACTCAATGGAGAATACAATGACCAAGAATTGATGAGATTAGTGGGGTTAGGAATTGCTTGCACCCGTTGCAACCCGCAGTTAAGACCAAGCATGAGACAAATAGTAAGCATTCTTGATGGCAATGACAAATTACTTGTCCATAATAACAAGGAGAGCAGGGAAGAATGGAGACAAAGAAATTATTGTTCTTTGTCAATGATTAAGAGAATCCAAGCTCTAGGAATACAGTAA 2520 0.444 MKLNPLCIVLPPNSGEMVLPLEKGVQQEPFQTPKKQVEAKQPHRACGGHVLASLGDFLGKLYDSGWWRICQKGEHKEKHNSGVLFHDMDGVQVSVNIGRDNPRIFSYAELFIGSNGFSEDQVLGSGGFGKVYKAVLPSDGTVVAVKCCLAGKGKQFEKSFAAELTAVADLRHKNLVRLRGWCVNEDQLHLVYDYMPNRSLDRVLFRRHENLKAKPLQWGQRGKVVKGLAAALYYLHEQLETQIIHRDVKSSNVMLDSHYNARLGDFGMARWLEHELEYKYDNRKTISIRNDHFRLGETSRIGGTIGYLPPESLQKPSNATSKSDVFSFGIVVLEVASGRRAIDLTQPDEQMILLDWIRRLSDEGKLLEAADTRLPDGSFMLSEMQHFIHTGLLCTLHDPQLRPSMKWVVEALSDISFKLPALPSFLSHPLYISLSSPSDTSHSPSSTSGTSSTTDNASIITTNTSSNYVTAAGETVYVTAEYKNSEIISSKSMNHHRPFPVVETPREISYKEIVSATDNFSDSRRVAELDFGTAYHGILDDQCHVLVKRLGMKTCPALRDRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVIYDYSASRILSQLLMHHNNGSRSGASFLQWHHRYNIVKALASAVLYLHEEWDEQVIHRNITSSAVILEQDMNPRLSSFALAEFLSRNEHGHHVVADTRKSVRGIFGYMSPEYVESGEATTEADVYSFGVVVLEVVSGQMAVDFRQPEVLLVKKVHEFETRKRPLKELADIRLNGEYNDQELMRLVGLGIACTRCNPQLRPSMRQIVSILDGNDKLLVHNNKESREEWRQRNYCSLSMIKRIQALGIQ* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun238g00073 839 FunFam Receptor like protein kinase S.2 195 418 - -
Phacun238g00073 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Phacun238g00073 839 MobiDBLite consensus disorder prediction 437 458 - -
Phacun238g00073 839 ProSiteProfiles Protein kinase domain profile. 520 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun238g00073 839 PANTHER - 79 414 - -
Phacun238g00073 839 ProSiteProfiles Protein kinase domain profile. 117 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun238g00073 839 SUPERFAMILY Protein kinase-like (PK-like) 101 452 IPR011009 -
Phacun238g00073 839 Pfam Protein tyrosine and serine/threonine kinase 526 800 IPR001245 GO:0004672|GO:0006468
Phacun238g00073 839 ProSitePatterns Protein kinases ATP-binding region signature. 123 152 IPR017441 GO:0005524
Phacun238g00073 839 Pfam Protein kinase domain 118 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun238g00073 839 Gene3D Phosphorylase Kinase; domain 1 479 596 - -
Phacun238g00073 839 FunFam Receptor like protein kinase S.2 91 194 - -
Phacun238g00073 839 Gene3D Transferase(Phosphotransferase) domain 1 195 418 - -
Phacun238g00073 839 Gene3D Transferase(Phosphotransferase) domain 1 601 826 - -
Phacun238g00073 839 Gene3D Phosphorylase Kinase; domain 1 89 194 - -
Phacun238g00073 839 FunFam Receptor like protein kinase S.2 480 596 - -
Phacun238g00073 839 FunFam Receptor like protein kinase S.2 598 824 - -
Phacun238g00073 839 SUPERFAMILY Protein kinase-like (PK-like) 492 801 IPR011009 -
Phacun238g00073 839 SMART serkin_6 117 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun238g00073 506 802 Receptor kinase-like Gene Family AT5G55830 36.877 2.94e-54 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phacun238g00073 Pkinase 5.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun238g00073 - - vun:114184452 1558.5