Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun238g00066 ATGTCCTTCAATCAATCAAAGTCCGAGAAGAGCGACTCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAACAGCGAGGCTCCTCCGGCGGTGCGTACGGTAGGGGCGGAGGCGGCGGTGGCGGCGCCGGGCCTTCTCCGTCGCTCTCCTCAAACCGGAGTTTTAACAAGAAGTCTAATAACAATGCACAAGGTGGCCAATCTAGGGTAAACCCTGCAGTGGTGAATTCGGCTGAGTCTAATAGTACTTATGCAGCCCGGACTGTACCTAACGGTTCCCACGTACAGCCGCAGATTCATGGAGTATCTGATGCGCCAGTTTCGAATGCAACTGCCAAGCCATTTGAATCGTCAGCTGTGCAAAGGAGCACCAGAACTGTTCCAAAAGCTCCTACCTCTCAGCCTCTCTCTATGAGTTCTGATCCAGCAGCTCCTACAACTCCTGCTAAGGATGCATCTAAGGCATTTCCTTTCCAATTTGGATCCATCAGTCCTGGCTTTATGAATGGGATGGCTATTCCTGCTCGCACAAGCTCAGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCGACATGATTCTTTTAGACCTGCATCCTCAGTGCCAACTCCTCCTGTTCCAAAGCAGCAGGCAGTGAAGAAGGAGGCAGGTGTTACTGATCAATCTAATGCTGGGGAGACTCATACTGCGCCTAGGGCAAAAAAGGATACTCAAGTGTCACCGTTACCCCCAGCAAGCCAGGTGCAGAAGCCTTCTGTCATTCCTTTAACTGGAATTTCAATGCCAATGCCATACCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCCAATCCACAGATTCAATCTCAAGGTATGTCATCAGCACCGCTTCAGATGCCATTGCCGATGCCTTTGCCAATTGGAAGTGCCACACAAGTGCAACAACCGGTTTTTGTTCCAAACCTTCAACCTCATCCTATCCATCCTCAGGGAATCATGCATCAGGGCCAAAGCATGGGTTTCACTCCTCAAATTGGCCCTCAGTTGTCCCATCAGTTAGGCAACATGGGTATTGGAATTAGCCCACAATATCCACCTCAGCAAGGAGGGAAGTTTGGTGGTCCTCGTAAAACTACTCCTGTCAAGATAACTCATCCTGAGACACACGAAGAGCTAAGACTTGATAAAAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGTGAGGCCTCATTCTGGTATGGCTTCTCAATCTCAGCCTGCCCAGCAATTTGCAGCTTCTCATCCTATAAATTACTATCCATCGAGCTCATATAGTACCAATTCTCTCTTTTATCCAACTGCTAATAGCCAGATAACACCTAATTCCCAGCCACCCAGATTTAATTATGCTGTGAGCCATGGTCCTCAGAATGTTAGTTTTGTAAATTCATCATCTCATAGTTCCCTGCCTGTTAATAAAGCTGGCACTCCTATTACTGGAAATGCTGAACTACCTAATCCAGAGTTTTCCCGTGATGTGCACAATGCAATCTTATCTGCTCCATCAGGAGTAACCTCTGTGTCAATTAAGCCAAGTGGTGGATCTGGTGTTGCAGATTCGTTTGCCAATTCCAGTACCCAAAAGAGTGTGTCTCCTAGTTCTTCATCAACACCTGGTGATACTTTCTCTTCTGCACCACTAAAAGGGTCTGAAATAGCTGAAATATCTTCCCAGCAGTCTAAGTTATCCACTGATTCATCAATTTTGAGCTCATTTCCAAATCTATCTTCTGCGAGGCCTGCATCAGCTTCCTTGTTGCTTTCTACATCTGCTGTTAGTGAAGATTCTGTTTCAGTTATACCTAATAATGAAGGCATAAAGAAGGAATCTGTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAAATACAGAAGAAAGGGCAATCACAGCATCTGGTTGCTGTGCAATCTCCTGGTGTGGTTAATGTGCCTTCCCAAACTGTTGATGGTGGTATCCCTGATGAAGTTTCTGAAACTGTGGGAACCAAAACAAACCATTCTGCAGTAATTACCAGGGAAAATCTCTCAGCTGCAGCTTCTGACTTAGTATCAGCTACTAGTGGCAGCATGCCTTATGCTGTTGAAATGAAAACTAATGATTCTACACAAGTGTCAGCTCGTGCTTCAGCAGAAGGACATTTTATAGGGGTGGATGATTTTAACAATCTTAAGAGTGCTGAGATAGATGAACTGTTACAACAGGATAAACTATTGCAGCCAAATATTATGGAAGTGGTGGATAAAACAGAAAACTTGTCTCTTGAAGGACGTAAACAAGATGTCAGTGTTGGTGGGACAGAATTAAAACAAACTAAGCAGGGTGATGTAAAGCTAAACACTGAGGCTGTAGCCTTGAGGTCTGTGCAGCCCGGGCAGGATGGATCTACAAGTTCTAGTGCAGGATGTGAGGGGATGGCTGATGATACTGCTTTGGATGCAAAAGATGTTTCCTTGATCAGAAGTGACGGTGTAATTATTAATGAAGCTGTTTCTACAAATTCTGGCACATTTGATCAGCAGTCTGCTGATATTATAGAAACATCTTTAAAACATTTGAAGGATGGTTCAGACAGTACTGGCAGTGGTGCAGTGTCTCTTCCAGCATCAGGTACCAAGGACAAACCGGTTTCAGAGCCTAGTAAGGTGAAACCTACGTCAAAGGGTAAGAAGAAAAGAAAAGAGATTCTTCTGAAGGCCGATGCTGCTGGGTCATCTGATCTTTATAATGCATACACGGGACCTGAGGAGAAGAAAGAATCTGTGATAAGTGCAGAAAAAACAGAAAGTGATTCTGCTTCTGGAAATTTAGAGCAGTTGCCTACTGATGCTGCACTGTCAGATGCTGTAGCAAACAAGCAATCTAAGCAGAGTAAAGCTGAACTTGAAGATTGGGAGGAAGCTGCTGACATGTCTACGCCAAAACTAGAAGTTTCAGATGAAACTGAACAGAGGGAAGGAAGTGCAGTTACTGGCAAAAAGTACTCCAGAGATTTCCTTTTGAAATTTTCAGAGCAATGCTCTGATCTTCCTGACGGCTTTGAAATCACAGCAGACATAGCTGAGGTTTTGATTAATCCTAATTTTAGTTCTCATGTAATTGAACGTGATTCACCTTCTACTGGAAGAATTATTGATAGGTCAGGCAGCATGTCTCGTCGTGGTAGTGGTATTATTGAGGATGACAAATGGAATAAAGTTTCCAATGCATATCATTCTGGTATGCGTTTGGATGGTGTTGGTGGTAATGCAGGATTTCGTCCTGGCCAAGGAGGGAATTTTGGTGTTTTAAGGAATCCACGAACACAGACACCTGTGCAATATGCTGGAGGGATTCTTTCTGGTCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGAGAAAGGTGGCAGCGTGCTACAAACTTCCAGCATAGGGGTTTAATTCCATCTCCTCAAACTCCTTTACAGATGATGCACAAAGCTGAGAGGAAGTATGAGGTGGGTAAAGTGACTGATGAGGAAGAGGCGAAGCAGAGGCAGTTGAAGGGCATATTAAACAAATTAACTCCTCAGAATTTTGAGAAGCTTTTTGATCAGGTTAGAGCAGTTAATATTGACAATGTAGTTACTCTCAATGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCTGCTGCATTGCCTGATCTCAGTCAAGACAATGAAAAGATAACTTTTAAGAGATTATTATTAAACAAGTGTCAGGAAGAATTTGAAAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGAAGGAGAGGTCAAGCTGTCTAAAGAGGAAAGAGAAGACAAACGAACCAAGGCACGGAGACGGATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAGAAAAAAATGTTGACAGAGAGGATTATGCATGAATGCATCAAGAAGTTATTGGGTCAGTATCAGGATCCAGATGAAGAAGACATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAAGAACATATGGATGCGTATTTTGAAATGATGAGATCATTGTCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGCTGAAGGATGTAATTGATTTGAGAAGGAATAAATGGCAACAAAGAAGAAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTTCACAAGAGAGGATGGCCCAAGCTGGTAGATTGGGTCGTGGTCCAGGCAACAATCCATCTAGAAGGATGCCTATGGATTTTGGTCCAAGAGGGTCATCTATGTTATCTCCTAATGCTCAGATGGGTGGAGTGCGTGGATTGCCTAATCAAGTTCGTGGATATGGTTCCCAGGATGCTCGTAGTGAGGAAAGGCAAACTTACGAGACTAGGACATTGTCAGTTCCCTTACCTCAAAGACCTTTAGGTGATGAATCAATAACCTTGGGACCAATGGGTGGTCTTGCCCGAGGAATGTCCATTAGAGGTCCACCTGCAGTTTCAAGTTCAACTGGTCTTAATGGTTTTAATAATTTGTCTGAGCGCACTTCATACAGCTCCAGGGATGATCCTGCATCAAGATATGCCCCAGATAGATTTTCTGGTTCTACTTATGATCAATCCAGTGTTCAAGACCATAATGTGAACTATGCGAACAGGGACTTTAGAAATGCAAATAAGATTATTGAAAAACCTGTTGTAACTTCACCACCTGCCAGAACACAAGGAACAGCAGTCTCCCAAAATATTAGCCAAGATCGGTTACAGGACATGTCCATGTTAGCAATCAGAGAATACTACAGTGCCAGAGATTTGAGTGAAGTTGTTCTATGTATCAAAGATCTGAACTCTCCAAGCTTTCATGCTTCCATGGTTTCTCTCTGGGTCACAGACTCCTTTGAGAGGAAGGACACAGAGAGAGATCTTTTGGCCCAGCTGCTTGTCAAGCTTGTGAAATCTCAGGATGGACCCTTGGGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTTAGTACTTTGGAAGATGCGGTTAATGATGCCCCCAAAGCAGCAGAGTTTCTTGGCCGTGTTTTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAACGAGATTGGACAGTTAATACATGAGGGTGGAGAGGAACCGGGAAGCCTATTAAAAGTTGGGCTTGCAGCTGATGTTCTCGGAAGCATCTTGGAGGTAATAAAAATGGAGGAGGGTGATGCTGTTTTGAGTGAGATCTGTGCGAGCTCCAACTTGCGGTTGGAGACCTTCCGGCCGCCGGAACCTCGTACATCAAGGAAGTTAGAGAAATTTATTTAG 5445 0.44 MSFNQSKSEKSDSVYRKSGRSASFNQQRGSSGGAYGRGGGGGGGAGPSPSLSSNRSFNKKSNNNAQGGQSRVNPAVVNSAESNSTYAARTVPNGSHVQPQIHGVSDAPVSNATAKPFESSAVQRSTRTVPKAPTSQPLSMSSDPAAPTTPAKDASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKRDQARHDSFRPASSVPTPPVPKQQAVKKEAGVTDQSNAGETHTAPRAKKDTQVSPLPPASQVQKPSVIPLTGISMPMPYHQSQASVHFGGPNPQIQSQGMSSAPLQMPLPMPLPIGSATQVQQPVFVPNLQPHPIHPQGIMHQGQSMGFTPQIGPQLSHQLGNMGIGISPQYPPQQGGKFGGPRKTTPVKITHPETHEELRLDKRADAYSDGGSSGVRPHSGMASQSQPAQQFAASHPINYYPSSSYSTNSLFYPTANSQITPNSQPPRFNYAVSHGPQNVSFVNSSSHSSLPVNKAGTPITGNAELPNPEFSRDVHNAILSAPSGVTSVSIKPSGGSGVADSFANSSTQKSVSPSSSSTPGDTFSSAPLKGSEIAEISSQQSKLSTDSSILSSFPNLSSARPASASLLLSTSAVSEDSVSVIPNNEGIKKESVSRSNSLKDNQKKIQKKGQSQHLVAVQSPGVVNVPSQTVDGGIPDEVSETVGTKTNHSAVITRENLSAAASDLVSATSGSMPYAVEMKTNDSTQVSARASAEGHFIGVDDFNNLKSAEIDELLQQDKLLQPNIMEVVDKTENLSLEGRKQDVSVGGTELKQTKQGDVKLNTEAVALRSVQPGQDGSTSSSAGCEGMADDTALDAKDVSLIRSDGVIINEAVSTNSGTFDQQSADIIETSLKHLKDGSDSTGSGAVSLPASGTKDKPVSEPSKVKPTSKGKKKRKEILLKADAAGSSDLYNAYTGPEEKKESVISAEKTESDSASGNLEQLPTDAALSDAVANKQSKQSKAELEDWEEAADMSTPKLEVSDETEQREGSAVTGKKYSRDFLLKFSEQCSDLPDGFEITADIAEVLINPNFSSHVIERDSPSTGRIIDRSGSMSRRGSGIIEDDKWNKVSNAYHSGMRLDGVGGNAGFRPGQGGNFGVLRNPRTQTPVQYAGGILSGPMQSMVNQGGMQRNSPDGERWQRATNFQHRGLIPSPQTPLQMMHKAERKYEVGKVTDEEEAKQRQLKGILNKLTPQNFEKLFDQVRAVNIDNVVTLNGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSKEEREDKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFEMMRSLSNNMNLSSRVRFMLKDVIDLRRNKWQQRRKVEGPKKIEEVHRDASQERMAQAGRLGRGPGNNPSRRMPMDFGPRGSSMLSPNAQMGGVRGLPNQVRGYGSQDARSEERQTYETRTLSVPLPQRPLGDESITLGPMGGLARGMSIRGPPAVSSSTGLNGFNNLSERTSYSSRDDPASRYAPDRFSGSTYDQSSVQDHNVNYANRDFRNANKIIEKPVVTSPPARTQGTAVSQNISQDRLQDMSMLAIREYYSARDLSEVVLCIKDLNSPSFHASMVSLWVTDSFERKDTERDLLAQLLVKLVKSQDGPLGQAQLIKGFESVLSTLEDAVNDAPKAAEFLGRVFAKAITEHVVSLNEIGQLIHEGGEEPGSLLKVGLAADVLGSILEVIKMEEGDAVLSEICASSNLRLETFRPPEPRTSRKLEKFI* 1815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun238g00066 1814 Pfam MIF4G domain 1191 1413 IPR003890 GO:0003723|GO:0005515
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 47 148 - -
Phacun238g00066 1814 Gene3D - 1191 1426 - -
Phacun238g00066 1814 FunFam Eukaryotic translation initiation factor 4G 1191 1426 - -
Phacun238g00066 1814 SUPERFAMILY ARM repeat 1185 1415 IPR016024 -
Phacun238g00066 1814 ProSiteProfiles MI domain profile. 1626 1750 IPR003891 -
Phacun238g00066 1814 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 355 1814 IPR045208 GO:0003743
Phacun238g00066 1814 SMART ma3_7 1627 1741 IPR003891 -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 624 639 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 1420 1437 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 800 817 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 474 500 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 867 908 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 1282 1311 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 1 254 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 970 1003 - -
Phacun238g00066 1814 Pfam MA3 domain 1632 1739 IPR003891 -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 409 424 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 920 950 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 962 1003 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 620 644 - -
Phacun238g00066 1814 FunFam Eukaryotic translation initiation factor 4G 1620 1813 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 1050 1070 - -
Phacun238g00066 1814 Coils Coil 1273 1293 - -
Phacun238g00066 1814 SMART if4_15 1191 1413 IPR003890 GO:0003723|GO:0005515
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 397 424 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 1535 1584 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 1420 1459 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 521 561 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 17 32 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 1536 1562 - -
Phacun238g00066 1814 Gene3D - 1618 1814 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 800 819 - -
Phacun238g00066 1814 MobiDBLite consensus disorder prediction 474 488 - -
Phacun238g00066 1814 SUPERFAMILY ARM repeat 1621 1812 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun238g00066 1 1813 Eukaryotic Initiation Factors Gene Family AT3G60240 45.531 0.0 1289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun238g00066 K03260 - gmx:100796636 2857.78