Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun238g00051 ATGGTTAGGAATCAGAAAAGTGTAGTAGGTACCATTGGGGCTGTTGGAGAAGGCGTAACCACCCCTCTGGTGTTGTATATCAGTAGCCGGATGATCAATAGCATTGGGAGTTCATCCAACACGGATGGAAACACCTTCATCCATAACATTAACAAGAATGCAGTGGCGTGGTTATATTTAGCTGGTGTCTCTTTTGCCGTTTGCTTCGTCGAGGGTTACTGTTGGACAAGAACAAGCGAAAGACAAGCAGCGAGAATGAGATACAGGTATCTGAAAGCAGTGCTTAGACAAGATGTCGCGTACTTCGATTTGCATGTCACAAGCACGTCAGAGATCATCACCAGCGTCTCCAACGACAGCCTCGTAGTCCAAGATGTTCTTAGTGAAAAGGTTCCGAATTTCTTGATGAACATTTCATTGTTCGTTGGGAGCTACATAGCGGCGTTTGCAATGTTGTGGAGGCTGGCCATTGTGGGGTTTCCTTTCGTGGTTCTTCTGGTGATCCCGGGTTTAATCTACGGCAAGACTTTGTTGGGGTTGTCTAGTAGAATCAGAGATGAGTACAATGAAGCAGGAACAGTGGTGGAACAAGCAATTTCATCCATCAGAACCGTTTATTCCTTCGTTGGGGAAAGCAAGACCATGAACGCTTTCTCAAACGCGCTTCAAGGGACGGTGAAGTTGGGCCTGAAGCAAGGCTGGGCCAAAGGCTTAGCCATTGGTAGCAACAGCGTCGTTTTCGGCATTTGGTCTTTCTTGTGCTATTACGGCAGCAGACTCGTCATTTATCATGGCGTCAAAGGAGGAACAGTTTTCGCGGTTGGAGCAGCAATCGCTGTTGGAGGATTGGGACTGGGAGCGGGTTTAACGAACGTGAAGTACTTTTCGGAAGCGGGTGCGGCAGCGGAGCGTATAAAGGAGGTGGTAAAGAGGGTTCCGAGGATTGATTCTGAGAGCGAGGAAGGGGAGATTCTGGAGAGAGTTTACGGGGAAGTGGAATTTGAGGGGGTGGAGTTTGCGTATCCGTCGAGACCAGAAAGTGCAATATTGAATGGGTTGAGTGTGAGGTTTCCTGCAGGGAAGAGAGTGGCGTTGGTTGGGGAGAGTGGGTCTGGGAAGTCAACGGTGATAGCGCTAATGCAGAGGTTCTATGACCCGGTGGTAGGAGAGGTGCGTTTGGATGGGGTTGGGATTCAGAAGCTGCAGGTCAAGTGGCTTAGATCGCAGATGGGGTTGGTGAGCCAGGAGCCTGCTCTGTTTGCGACAAGCATTAAAGAGAACATACTTTTCGGCAAAGAGGATGCCACGGAGGACCAAGTTGTTGAGGCTGCAAAAGCTGCCCATGCCCATGATTTTATCTCCCTGCTGCCTCACGGTTACCAAACACAGGTGGGAGAGAGGGGGGTTCAGATGTCAGGCGGACAGAAACAGAGGATAGCAATTGCGAGGGCAATAATCAAGAAACCGCGAATTCTCCTTCTGGACGAAGCAACAAGCGCGCTAGACAATGAATCGGAGCGACTCGTTCAACAGGCATTGGACAACGTCGCCGAGGGTTGCACCGCTATCATCATCGCCCACCGTTTATCGACCATCCAAAACGTAGACCTCATCGCCGTCTTCCGGGGCGGAAAGGTCATAGAGATGGGCTCGCACGACGAGCTCCTCCAAAACGACACCGGCGCCTATGCCTCCGCGTTCCGCCTCCAGCAACAAACGGAGAAATCGAAAGCAGACGAAAGCGCGGAAACCGTTGCTCCTGGAAGTGTTCCCTGCTCGATAACAACCACCGACACAGAAAACGACCACCTGATGGGGCCATTTGGTGGGAGTTGTAGTGACGTGGCGGAAGCGAAGAAGGTAGGCGCGCCGTCGTTTCGTAGACTTGTATCGCTGAGCGTCCCCGAGTGGAAGCACGTGGTTTTGGGGTGCTTAAACGCGATGGTGTTCGGTGCCGTTCAGCCAGTTTACGCATTCACGATGGGGTCCACGATACTGTTGTATTTTCACGCGGATCATGAGGAGATGGTGAGGAAGACTAGGATCTACTCGTTGGCCTTTCTGGGCCTCTTTGTGGTGTCTTTCATTGCGAATATTGGGCAGCATTATTGTTTCGCGTACATGGGGGAATACTTGACCAAACGGGTCAGAGAGACCGTCCTTTCCAAAATCCTCACTTTCGAAGTTGGATGGTTTGATTTGGACGAAAACTCCAGTGGCGCCATCTGTTCAAGGCTTGCCAAAGACGCCAATGTGGTGAGGTCTCTAGTGGGAGATAGAATGGCATTGCTGGTACAGACATTTTCCGCGGTGCTAACAGCCTACACATTAGGTCTGATAATTTCCTGGAGGCTTTCTATTGTTATGATAGCGGTACAACCTATCATCATTGCTTGCTTTTACACAAGGCGTGTTCTTCTGAAGAGCATGTCCAACAAGTCCATGAAGGCCCAGCAACAAAGCAGCAAACTAGCATCAGAAGCGGTTTCCAATCTCCGAACCGTCACTGCCTTTTCTTCTCAGGACCGGATTCTGAAAATGCTTGAAGCAGCCCAACTGGGCCCAAGCAGAGAGAACATTCGGCAGTCATGGTTTGCTGGTATTGGGCTTGGATTCTCCCAAGGCCTTGCATCTTGCGTTTGGGCCCTAAACTATTGGTACGGTGGGAGGCTCATCTCGCACGGGTACTTAACAACAAAAACCTTCTTTGAGAGCTTCATGGTTTTGGTGAGCACTGGGAGGATAATTGCGGATGCGGGAAGCATGACCACGGATATTGCTAGAGGTGCTGATGTTGTGGCCTCTACTTTTGGCATCATCGATAGGTGTACAAAAATAGAGCCTGATGATCCAAATGGGTACAAGGCAGAGAAGTTGGTTGGTGAAATAGAGTTTCATGAGGTGCATTTTACGTACCCTACCAGGCCTGATGTGGCTATCTTCCAAGGGTTCTCTATGAAAATGGAGGCAGGGAAATCAACGGCATTGGTGGGGCAAAGTGGATCTGGGAAATCAACGATCATAGGGCTAATAGAGAGATTTTACGATCCACTTAGGGGGATGGTGACAATAGATGGGATGAACATAAGATCGTATAACCTAAAGTCACTAAGGAAGCACATAGCACTTGTGAGCCAGGAGCCAACGTTGTTTGGTGGGACCATAAGAGAGAACATTACATATGGAAGAGGTGGGAGGGTTGATGAGAGTGAGATGATAGAGGCAGCACGAGCAGCGAACGCTCATGATTTCATAGCGGGTCTGAAGGAGGGTTACGAGACATGGTGTGGGGAAAAAGGGGTACAACTTTCAGGGGGTCAAAAGCAAAGGATAGCAATAGCAAGGGCCATACTGAAAAACCCTAAGGTGTTGCTGTTGGACGAGGCCACAAGTGCATTGGATGGTCAATCAGAGAAGGTGGTGCAAGATACCTTGACGAGGGTAATGATAGGGAGGACCAGCGTGGTGGTGGCACACAGGTTGAGCACCATTCACAATTGTGATGCTATTGCTGTGATGGAAAAGGGGAGGGTGGTGGAGACTGGAACCCACTCCTCCTTGTTGGCCAAAGGACCATGTGGAGCTTATTACTCTTTGGTGAGTCTTCAGACTAGACATGCAGCCACACCCAACAACACTTCTACTAAAGCAACCCACTCTGTCAGTTGA 3669 0.4985 MVRNQKSVVGTIGAVGEGVTTPLVLYISSRMINSIGSSSNTDGNTFIHNINKNAVAWLYLAGVSFAVCFVEGYCWTRTSERQAARMRYRYLKAVLRQDVAYFDLHVTSTSEIITSVSNDSLVVQDVLSEKVPNFLMNISLFVGSYIAAFAMLWRLAIVGFPFVVLLVIPGLIYGKTLLGLSSRIRDEYNEAGTVVEQAISSIRTVYSFVGESKTMNAFSNALQGTVKLGLKQGWAKGLAIGSNSVVFGIWSFLCYYGSRLVIYHGVKGGTVFAVGAAIAVGGLGLGAGLTNVKYFSEAGAAAERIKEVVKRVPRIDSESEEGEILERVYGEVEFEGVEFAYPSRPESAILNGLSVRFPAGKRVALVGESGSGKSTVIALMQRFYDPVVGEVRLDGVGIQKLQVKWLRSQMGLVSQEPALFATSIKENILFGKEDATEDQVVEAAKAAHAHDFISLLPHGYQTQVGERGVQMSGGQKQRIAIARAIIKKPRILLLDEATSALDNESERLVQQALDNVAEGCTAIIIAHRLSTIQNVDLIAVFRGGKVIEMGSHDELLQNDTGAYASAFRLQQQTEKSKADESAETVAPGSVPCSITTTDTENDHLMGPFGGSCSDVAEAKKVGAPSFRRLVSLSVPEWKHVVLGCLNAMVFGAVQPVYAFTMGSTILLYFHADHEEMVRKTRIYSLAFLGLFVVSFIANIGQHYCFAYMGEYLTKRVRETVLSKILTFEVGWFDLDENSSGAICSRLAKDANVVRSLVGDRMALLVQTFSAVLTAYTLGLIISWRLSIVMIAVQPIIIACFYTRRVLLKSMSNKSMKAQQQSSKLASEAVSNLRTVTAFSSQDRILKMLEAAQLGPSRENIRQSWFAGIGLGFSQGLASCVWALNYWYGGRLISHGYLTTKTFFESFMVLVSTGRIIADAGSMTTDIARGADVVASTFGIIDRCTKIEPDDPNGYKAEKLVGEIEFHEVHFTYPTRPDVAIFQGFSMKMEAGKSTALVGQSGSGKSTIIGLIERFYDPLRGMVTIDGMNIRSYNLKSLRKHIALVSQEPTLFGGTIRENITYGRGGRVDESEMIEAARAANAHDFIAGLKEGYETWCGEKGVQLSGGQKQRIAIARAILKNPKVLLLDEATSALDGQSEKVVQDTLTRVMIGRTSVVVAHRLSTIHNCDAIAVMEKGRVVETGTHSSLLAKGPCGAYYSLVSLQTRHAATPNNTSTKATHSVS* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun238g00051 1222 Pfam ABC transporter transmembrane region 9 275 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phacun238g00051 1222 Pfam ABC transporter transmembrane region 641 911 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phacun238g00051 1222 Gene3D ABC transporter type 1, transmembrane domain 8 929 IPR036640 GO:0005524|GO:0016020
Phacun238g00051 1222 PANTHER ABC TRANSPORTER B FAMILY 8 698 IPR039421 -
Phacun238g00051 1222 FunFam ABC transporter B family member 4 322 577 - -
Phacun238g00051 1222 SMART AAA_5 990 1163 IPR003593 GO:0016887
Phacun238g00051 1222 SMART AAA_5 359 553 IPR003593 GO:0016887
Phacun238g00051 1222 CDD ABC_6TM_Pgp_ABCB1_D1_like 8 305 - -
Phacun238g00051 1222 FunFam ABC transporter B family member 4 953 1211 - -
Phacun238g00051 1222 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 332 568 IPR003439 GO:0005524
Phacun238g00051 1222 Gene3D - 322 571 IPR027417 -
Phacun238g00051 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 324 570 IPR027417 -
Phacun238g00051 1222 CDD ABC_MTABC3_MDL1_MDL2 332 570 - -
Phacun238g00051 1222 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 8 297 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phacun238g00051 1222 Pfam ABC transporter 350 499 IPR003439 GO:0005524
Phacun238g00051 1222 SUPERFAMILY ABC transporter transmembrane region 627 947 IPR036640 GO:0005524|GO:0016020
Phacun238g00051 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 953 1203 IPR027417 -
Phacun238g00051 1222 FunFam Putative ABC transporter B family member 8 609 951 - -
Phacun238g00051 1222 CDD ABC_MTABC3_MDL1_MDL2 963 1203 - -
Phacun238g00051 1222 Pfam ABC transporter 982 1131 IPR003439 GO:0005524
Phacun238g00051 1222 ProSitePatterns ABC transporters family signature. 471 485 IPR017871 GO:0005524|GO:0016887
Phacun238g00051 1222 SUPERFAMILY ABC transporter transmembrane region 8 313 IPR036640 GO:0005524|GO:0016020
Phacun238g00051 1222 Gene3D - 961 1213 IPR027417 -
Phacun238g00051 1222 FunFam ABC transporter B family member 1 6 329 - -
Phacun238g00051 1222 ProSitePatterns ABC transporters family signature. 1103 1117 IPR017871 GO:0005524|GO:0016887
Phacun238g00051 1222 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 647 928 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phacun238g00051 1222 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 963 1200 IPR003439 GO:0005524
Phacun238g00051 1222 CDD ABC_6TM_Pgp_ABCB1_D2_like 631 946 - -
Phacun238g00051 1222 Gene3D ABC transporter type 1, transmembrane domain 931 960 IPR036640 GO:0005524|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun238g00051 642 1218 Calmodulin-binding Proteins AT2G36910 36.993 2.55e-111 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun238g00051 K05658 - gmx:100791575 1991.08