Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun238g00005 ATGAAGTTCAACATTGCGAATCCCACCACTGGATGCCAGAAGAAGCTCGAGATCGACGACGATCAGAAACTACGAGCATTTTGGGACAAGAGGATCTCACAGGAGGTCAATGGAGATGCACTTGGTGAGGAGTTTAAAGGCTATGTATTCAAAATTACTGGAGGCTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGCTGACCCCTGGTCGTGTTCGCCTGCTGCTTCATAGGGGAACTCCTTGCTTCCGTGGATATGGAAGGCGTAATGGAGAGCGCAGGAGAAAGTCTGTTCGTGGTTGCATTGTCAGCCCTGACCTCTCTGTTCTTAACTTGGTAATTGTGAAGAAGGGTGAAAACGACTTACCAGGATTGACTGACACTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCCTCCAAAATCCGGAAACTGTTCAACCTCTCCAAAGAGGATGATGTTAGGAAGTATGTCAACACCTACCGTCGGACCTTTACCACAAAAGCAGGGAAAAAAGTGAGCAAAGCTCCAAAGATACAAAGATTAGTGACTCCTCTTACCCTCCAAAGAAAGCGGGCAAGGATTGCTGATAAGAAAAAGAGAATTGCGAAGGCAAAATCAGAGGCAGCAGAGTACCAGAAACTCCTTGCCTCCAGGTTGAAGGAGCAGAGGGAACGCCGCAGTGAGAGTTTGGCCAAGAGGAGGTCCAAGATTTCCAGTGCTACTAAGCCAGCTCTATAG 744 0.4798 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKISSATKPAL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun238g00005 247 Coils Coil 189 216 - -
Phacun238g00005 247 PIRSF RPS6e 1 246 IPR014401 GO:0003735|GO:0005840|GO:0006412
Phacun238g00005 247 PANTHER 40S RIBOSOMAL PROTEIN S6 1 240 IPR001377 GO:0003735|GO:0005840|GO:0006412
Phacun238g00005 247 MobiDBLite consensus disorder prediction 219 237 - -
Phacun238g00005 247 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Phacun238g00005 247 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Phacun238g00005 247 MobiDBLite consensus disorder prediction 219 247 - -
Phacun238g00005 247 Gene3D - 133 234 - -
Phacun238g00005 247 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun238g00005 1 242 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 72.727 1.79e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun238g00005 K02991 - gmx:547746 437.573