LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phacun238g00002	ATGAAGTTCAATATTGCGAATCCCACCACTGGATGCCAGAAGAAGCTCGAGATCGACGACGATCAGAAACTACGAGCATTTTGGGACAAGAGGATCTCACAGGAGGTCAATGGAGATGCACTTGGTGAGGAGTTTAAAGGCTATGTATTCAAAATTACTGGAGGCTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGCTAACCCCTGGCCGTGTTCGCCTGCTGCTTCATAGGGGAACTCCTTGCTTCCGTGGATATGGAAGGCGTAATGGAGAGCGCAGGAGAAAGTCTGTTCGTGGGTGCATTGTCAGCCCTGACCTCTCTGTTCTTAACTTGGTAATTGTGAAGAAGGGTGAAAATGACTTACCAGGATTGACTGACACTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCCTCCAAAATCCGGAAACTGTTCAACCTCTCCAAAGAGGATGATGTTAGGAAGTATGTCAACACCTATCGTCGGACATTTACCACAAAAGCAGGGAAAAAAGTGAGCAAAGCTCCAAAGATACAAAGATTAGTGACTCCTCTTACCCTCCAAAGAAAGCGGGCAAGGATTGCTGATAAGAAAAAGAGAATTGCGAAGGCAAAATCAGAGGCAGCAGAGTACCAGAAACTCCTTGCCTCCAGGTTGAAGGAGCAGAGGGAACGCCGCAGTGAGAGTTTGGCCAAGAGGAGGTCCAAGATTTCCAGTGCTACTAAGCCAGCTCTATAG	744	0.4758	MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKISSATKPAL*	248

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phacun238g00002	247	Coils	Coil	189	216	-	-
	Phacun238g00002	247	PIRSF	RPS6e	1	246	IPR014401	GO:0003735\|GO:0005840\|GO:0006412
	Phacun238g00002	247	PANTHER	40S RIBOSOMAL PROTEIN S6	1	240	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Phacun238g00002	247	MobiDBLite	consensus disorder prediction	219	237	-	-
	Phacun238g00002	247	ProSitePatterns	Ribosomal protein S6e signature.	52	63	IPR018282	GO:0003735\|GO:0005840\|GO:0006412
	Phacun238g00002	247	SMART	Ribosomal_S6e_2	1	128	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Phacun238g00002	247	MobiDBLite	consensus disorder prediction	219	247	-	-
	Phacun238g00002	247	Gene3D	-	133	234	-	-
	Phacun238g00002	247	Pfam	Ribosomal protein S6e	1	128	IPR001377	GO:0003735\|GO:0005840\|GO:0006412

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phacun238g00002	1	242	Cytoplasmic Ribosomal Protein Gene Family	AT5G10360	72.727	1.79e-119	337

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phacun238g00002	K02991		-	gmx:547746	437.573

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