Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00093 ATGCCAGTCCTAGAAACACTTGGTGGTGCTCTTTTTGGTGCTGTTCTCCAGCTCCTATTTGACAAGCTCGATTCTCATCAACTTCTCCACTACTTTCGTAGGAGAAAGCTGGATGAGAAGCTGCTGAAAAAATTGAGGAGAAAGTTGGTGTCCATCAATGCTGTGGTTGATGATGCAGAACTAAAGCAGTTCAGAAATGCATATGTTAAAGCGTGGCTTGATGAGGTCAGAGACGTGTTGCTGGACACTGAGGATCTGCTGGATGAAATAGACTATGAATTCTCCAAAACCGAGTTTGAACTTCAATACCAAAGCAGTTCTAACAAGGTACGCATTCTTGAACCCAAGCTGAAAGAAATCCTAGATGACCTTGAATCTCTTTTAAACCAAAAGGATGATCTAGGTCTGAAAAATGTTGGTGTGGGATCGGAATTGGGTAATAAAGTGTTAGAGAAAAGAAATGAATCTTCATCGTTGGTGGCTGAAGAGGTTATTTATGGCAGAGATGAGGACAAAGAAATCATCCTTGATTGGTTGACATCTGACAGTAACAATCATAACAACCTCTCAATACTTTCTATTGTGGGTATGGGCGGGATGGGTAAGACCACACTTGCTCAACATGTATACAATGACCCAATGATAGAGGACATATTTGCTATCAAAGCCTGGGTTTGCGTTTCTGATGAATTCGATGTTTTCATGTTAACCAGAGCAATTTTTGAGTCAATTCACAAGGAAACTGATAATAGCAGAAACCTAGAAATGGTTCAGGGAAGATTGAAAGAAAAATTGAATGGAATGAAGTTTCTTCTGGTTTTGGATGACGTTTGGAACGAACACCGAGATCAATGGAAATCATTACAAACTCCTCTTAAATATGGTGCTAAGGGAAGTAAAATTCTTATCACAACACGTATTAACAAAGTTGCTTCTACCATGGAGTCAAACAATATTCACCAACTAAAGCAATTAAAAAAAGAACATAGTTGGCAAGTTTTTGCTAAACATGCATTTCAAGATGATAACTCTAAGTCGAATTCTGTGTTGGAGAAGATTGGCATGAAGATAGTTGAAAAGTGTCAAGGACTGCCTCTAGCCCTTGAAATGATAGGAGGTCTTTTACAGTCAAAGTCATCTGTTTCAGATTGGGAAGGTGTACTCAGAAGCAACATATGGGACTTACCAATCATCCCAGCTTTGTTATTGAGTTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCATTATTCCCCAAAGGCCATAAGTTTGACAAGGAGAGCTTAATTCTATCATGGATGGCTGAAAATTTTCTACAATGCTCTCAGCAGAGCAAGTCTCCTAAAGAAGTAGGTGAACAGTACTTTAATGATATGTTATCAAGGTCATTGTTCCAAAAGTCAATTTCAGAAGGAGAAATAATGTACAAAAGAACACAATTTGTGATGCATGACCTTCTGAATGATTTAGCAAAATATGTTTCTGGTGAAATATGCTACAATTTAGGTGTTGATAGACCAGGAAGCGTACCAAAGACTACCCGTCACTTTTCAACGGTAAATAATCCTGTTGAATGTGATGAGTATAGGAGTTTATGTGATGCTAAAAGGCTACGGACATTTTTGTCCAAGAATTGTGGGATGTCAATACAAGAGTTGATCTCCAACTTTAAATTTTTACGCATCTTATCTTTGTCTTACTCTCTTAACATAAAAGAGGTGCCTGAAACTATAGCCGATCTTATACATCTCCGTTCATTAGACCTTTCAAGCACAGACATAGAGAGACTTCCCGACTCAATTTGTTCACTTTATAACTTGCAAGTGTTGAAGCTCAACTACTGTAACCTTTTAAAGGAGTTGCCCTCGACTTTGCATGAGCTCACTAACTTGCACCTCCTTGAACTTATTGGAAGTTCATTAAGAAAGGTTCCAATTCTTTTAGGAAATTTGAAGAATCTTCAAGTATGGATGAGTGGGTTTGAGGTTGGCAAAAGCAATGAGTCCAATATTGAACAACTAGGAGAACTTGATGTTCACGGAGAGCTGTCAATTAAAAATCTTGAAAATATGGTGAATCCATGTGATGCATTGGCAGTGGATTTGAAGAATAAAACAAATCTTGTGGGGTTACATTTACAATGGAGTTTGCAGCAGAACACTGACGAATCAATAAAGGAAAGAGAAATACTAGAGAATCTGCAACCTTGCAGACATTTGGAGAAGTTGTCAATCTATGGCTATGGTGGAACACAATTTCCCCGTTGGTTATCTGATAATTCTCTATTGAATGTTGTGTCCTTAACTTTGAATACCTGTAAACATTGCCTGCAGTGGCCTTCCCTTGGACTTTTAACATCTCTCAAGTACTTGAAAATTTACTGCCTTCATCAAATAGTAAGGATAGATGCTGATTTTTATGGGAATAGCTCATCTGCATTTGCATCCTTGGAAACATTGATCTTTGATGATATGCCGGAATGGGAAGAATGGGAATGCAAGACAAGTGCTTTTCCAAGTCTTCGACGTCTTTCTGTGTGGAATTGTCCCAAACTGAAAGGGCACTTGTCAGAACACCTTTCTCATTTAAACTATCAAACTATAGATGTCTGCAAACAACTTGAGGCTTCGAATCTAGAAATTGAAGGTGTGGAGATGGAGACATTTTCATTTGATATGCTCCTATCTCATACTCCTCTTCAATCCTTAACTATTTATGGTTGTCGGGGCATGAATATTCCCATAAACCATTGCTACCATTTTCTTGTAGAATTGCGTATCATTAAATGTTGTGACTCTCTCACTAACTTCCCTCTAGACTTGTTTCCGAAACTCTGCTACCTTAGTTTAGGCAGATGTCATAACCTGCAAATGATATCACAGAGGCACCCTCACGGTCATTTGAAGAGTCTGATAATTAAAAAATGCTCTGAATTTGAATCATTTCCTAATGAAGGATTATTTGCACCTGAGCTAGAGACATTTCATATTGAAGAATTGGAGAAATTGAAATCAATGCCTAAATGCATGTCTTCCCTACTTCCATCTCTTAGTTATCTGCATATAAAGGATTGTCTGGGAGTGGAGTTGTCTGACGGATGTATGCCATTAAATCTAAAACACATTTATCTCTTGAATTGCTCTAAAGTTGTTGCCTCACTAAAGAACGGGGTTTGGGGAACCAACCCTTCCATACAATCCTTGTCTATTGAAAAAGAGGATGTGGAGTGTTTTCCGAGTGAAGGTTTGCTCCCAGTCTCCCTTACTAAGCTACACATAAAAGATTGTCCAAATCTTAAGAAACTGGACTACAGGGGTCTCTATCACCTTTCCTCTCTTCAGAAATTGCTGCTCAGTAACTATCCAATACTCCAATGTTTGCCAAAGGAAGGCCTGCCAGAATCCATTTCACAACTCAAAATTACAGATTGTCCGTTGCTCAAACAACGATGCAAGAAAAAAGAAGGCAAAGACTGGGAAAAGATTGCTCACATTAAAACTATATGGCTTGATAAGGAAGCGATAAACAAATATTGTTGA 3552 0.3834 MPVLETLGGALFGAVLQLLFDKLDSHQLLHYFRRRKLDEKLLKKLRRKLVSINAVVDDAELKQFRNAYVKAWLDEVRDVLLDTEDLLDEIDYEFSKTEFELQYQSSSNKVRILEPKLKEILDDLESLLNQKDDLGLKNVGVGSELGNKVLEKRNESSSLVAEEVIYGRDEDKEIILDWLTSDSNNHNNLSILSIVGMGGMGKTTLAQHVYNDPMIEDIFAIKAWVCVSDEFDVFMLTRAIFESIHKETDNSRNLEMVQGRLKEKLNGMKFLLVLDDVWNEHRDQWKSLQTPLKYGAKGSKILITTRINKVASTMESNNIHQLKQLKKEHSWQVFAKHAFQDDNSKSNSVLEKIGMKIVEKCQGLPLALEMIGGLLQSKSSVSDWEGVLRSNIWDLPIIPALLLSYYHLPSHLKRCFAYCALFPKGHKFDKESLILSWMAENFLQCSQQSKSPKEVGEQYFNDMLSRSLFQKSISEGEIMYKRTQFVMHDLLNDLAKYVSGEICYNLGVDRPGSVPKTTRHFSTVNNPVECDEYRSLCDAKRLRTFLSKNCGMSIQELISNFKFLRILSLSYSLNIKEVPETIADLIHLRSLDLSSTDIERLPDSICSLYNLQVLKLNYCNLLKELPSTLHELTNLHLLELIGSSLRKVPILLGNLKNLQVWMSGFEVGKSNESNIEQLGELDVHGELSIKNLENMVNPCDALAVDLKNKTNLVGLHLQWSLQQNTDESIKEREILENLQPCRHLEKLSIYGYGGTQFPRWLSDNSLLNVVSLTLNTCKHCLQWPSLGLLTSLKYLKIYCLHQIVRIDADFYGNSSSAFASLETLIFDDMPEWEEWECKTSAFPSLRRLSVWNCPKLKGHLSEHLSHLNYQTIDVCKQLEASNLEIEGVEMETFSFDMLLSHTPLQSLTIYGCRGMNIPINHCYHFLVELRIIKCCDSLTNFPLDLFPKLCYLSLGRCHNLQMISQRHPHGHLKSLIIKKCSEFESFPNEGLFAPELETFHIEELEKLKSMPKCMSSLLPSLSYLHIKDCLGVELSDGCMPLNLKHIYLLNCSKVVASLKNGVWGTNPSIQSLSIEKEDVECFPSEGLLPVSLTKLHIKDCPNLKKLDYRGLYHLSSLQKLLLSNYPILQCLPKEGLPESISQLKITDCPLLKQRCKKKEGKDWEKIAHIKTIWLDKEAINKYC* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00093 1183 Gene3D Ribonuclease Inhibitor 884 1174 IPR032675 -
Phacun1g00093 1183 Coils Coil 117 137 - -
Phacun1g00093 1183 Pfam NB-ARC domain 170 388 IPR002182 GO:0043531
Phacun1g00093 1183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 419 IPR027417 -
Phacun1g00093 1183 Gene3D Ribonuclease Inhibitor 666 883 IPR032675 -
Phacun1g00093 1183 Pfam Rx N-terminal domain 13 100 IPR041118 -
Phacun1g00093 1183 Gene3D - 324 403 IPR042197 -
Phacun1g00093 1183 Gene3D - 404 497 IPR036388 -
Phacun1g00093 1183 SUPERFAMILY L domain-like 486 870 - -
Phacun1g00093 1183 Gene3D - 16 129 - -
Phacun1g00093 1183 PANTHER DISEASE RESISTANCE PROTEIN RP 42 860 IPR044974 GO:0006952
Phacun1g00093 1183 Gene3D - 144 323 IPR027417 -
Phacun1g00093 1183 Gene3D Ribonuclease Inhibitor 516 665 IPR032675 -
Phacun1g00093 1183 PRINTS Disease resistance protein signature 606 622 - -
Phacun1g00093 1183 PRINTS Disease resistance protein signature 191 206 - -
Phacun1g00093 1183 PRINTS Disease resistance protein signature 264 278 - -
Phacun1g00093 1183 PRINTS Disease resistance protein signature 361 375 - -
Phacun1g00093 1183 Coils Coil 42 62 - -
Phacun1g00093 1183 FunFam Probable disease resistance protein At1g61300 148 318 - -
Phacun1g00093 1183 FunFam Probable disease resistance protein At1g63360 405 497 - -
Phacun1g00093 1183 SUPERFAMILY L domain-like 881 1167 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00093 188 429 WRKY Transcription Factor Family AT5G45050 27.419 5.19e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00093 - - pvu:PHAVU_011G193600g 1618.59