LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phacun1g00090	ATGAAGTTAGGTGTTAACCACAAAACAGACCATCATTGGTTACTGCTTTCATTTATGGCCAAAACACTTGTAACTCCCGGTGCCTTTAGCCTTGAATGGGAACCTGTGGAACAAGAATTGATCATAAGAAGACGGGGAAAAGTTTGTTGGAGAAGTGGGAAACTGAGGAACAATAGATTTGAGCACATTCCAGACGATGCACAACGCAGGTTGAAGTATACCATTGTGTCTAATGGGGATGAAAACTCCTTCTCTTTCACAACTACAAATGAAGAGGCTGACCCATGGTGGATTCTCTCAGAAAATGGGCAGATATCTGATGGTAAAGGATATGTTGCAAGGGCTGATTTGTGTTATGGATATAACACAGATGGAGGGTGCCAAAGATGGCAGGATATACCCAAGTGTAGGAATCCTGGTGATGTGTTCCAGAAAAAGACTGGTTACTTCAATGATCAGAATACAAGCATTGAAGGAAATATAAGTTATGGTTACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTAATTGCAGTGCATTCACAGAATTGTATTCTAATGGAACTGGATGGACATTCTTTCACTGGATTTCCGCGGAAAATTATACTTTTGATAGTACTGGTGAAAACTTTTACTTCCTGGTGGACATGTTAACTAATCATAAGGGTAAAAAAAAGTGGATATGGATAGGTGCAGTAGCAGCAACTGCTCTACTTGCAATTTGCCTATTCACTATTTGCCTAGCCTTAAAGAAACGAAAATTCGTGTTTCAAGGGAAGAAAAGGCAAAGAATGGTGATGAAGATGGTACATTTGGCAACTAGTAGTCGGTCATCTGCAATGGAAGATTTTGAAGTTGATTTAAAAAAGGGAAATGGCCTAAAATTTTTTAATTATACATCAGTTATGGCAGCAACAAATGGATTTTCATCTGAGAATAAGTTAGGACAAGGAGGCTTTGGACCCGTTTATAAGGGAATTCTTCAAACAGGCCAAGAGATTGCTGTAAAAAGACTTTCAAAAACATCTGGGCAAGGAATTGTGGAGTTTAAGAATGAACTAACACTAATATGTGAACTTCAGCATATGAATCTTGTGCAACTACTTGGTTGTTGCATTCATGAAGAAGAGAGGATTCTAATTTATGAGTATATGCCAAATAAAAGTTTGGATTTCTATCTATTCGATTCTACAAGAGGCAAATTATTAGATTGGAAGAAGCGGTTCAAAATAATAGAAGGAATTTCCCAAGGATTACTTTATCTTCATAAGTACTCAAGACTCAAAATTATCCACAGGGACTTGAAAGCTAGCAACATTCTTTTAGATGAAAATATGAATCCAAAAATATCAGATTTTGGAATGGCAAGAATATTCACACAAGAATCAGTCTCAAATACCAATAGAATTGTTGGGACACAGTGA	1425	0.374	MKLGVNHKTDHHWLLLSFMAKTLVTPGAFSLEWEPVEQELIIRRRGKVCWRSGKLRNNRFEHIPDDAQRRLKYTIVSNGDENSFSFTTTNEEADPWWILSENGQISDGKGYVARADLCYGYNTDGGCQRWQDIPKCRNPGDVFQKKTGYFNDQNTSIEGNISYGYSDCEASCWSNCNCSAFTELYSNGTGWTFFHWISAENYTFDSTGENFYFLVDMLTNHKGKKKWIWIGAVAATALLAICLFTICLALKKRKFVFQGKKRQRMVMKMVHLATSSRSSAMEDFEVDLKKGNGLKFFNYTSVMAATNGFSSENKLGQGGFGPVYKGILQTGQEIAVKRLSKTSGQGIVEFKNELTLICELQHMNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDSTRGKLLDWKKRFKIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARIFTQESVSNTNRIVGTQ*	475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phacun1g00090	474	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	430	442	IPR008271	GO:0004672\|GO:0006468
	Phacun1g00090	474	Gene3D	Transferase(Phosphotransferase) domain 1	385	474	-	-
	Phacun1g00090	474	ProSiteProfiles	Protein kinase domain profile.	309	474	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phacun1g00090	474	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	127	473	-	-
	Phacun1g00090	474	SMART	serkin_6	309	471	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phacun1g00090	474	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230	274	384	-	-
	Phacun1g00090	474	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase B120	385	474	-	-
	Phacun1g00090	474	Pfam	Protein kinase domain	310	473	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phacun1g00090	474	Pfam	PAN-like domain	140	188	IPR003609	-
	Phacun1g00090	474	SUPERFAMILY	Protein kinase-like (PK-like)	293	473	IPR011009	-
	Phacun1g00090	474	Gene3D	Phosphorylase Kinase; domain 1	266	384	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phacun1g00090	218	473	Receptor kinase-like Gene Family	AT4G05200	47.692	1.23e-73	243

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phacun1g00090		Pkinase	2.3e-34	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phacun1g00090	-		-	vun:114168194	829.706