Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00088 ATGAAGTTAGGTGTTAACCACAAAACAGACCATCATTGGTTACTGCTTTCATTTATGGCCAAAACACTTGTAACTCCCGGTGCCTTTAGCCTTGAATGGGAACCTGTGGAACAAGAATTGATCATAAGAAGACGGGGAAAAGTTTGTTGGAGAAGTGGGAAACTGAGGAACAATAGATTTGAGCACATTCCAGACGATGCACAACGCAGGTTGAAGTATACCATTGTGTCTAATGGGGATGAAAACTCCTTCTCTTTCACAACTACAAATGAAGAGGCTGACCCATGGTGGATTCTCTCAGAAAATGGGCAGATATCTGATGGTAAAGGATATGTTGCAAGGGCTGATTTGTGTTATGGATATAACACAGATGGAGGGTGCCAAAGATGGCAGGATATACCCAAGTGTAGGAATCCTGGTGATGTGTTCCAGAAAAAGACTGGTTACTTCAATGATCAGAATACAAGCATTGAAGGAAATATAAGTTATGGTTACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTAATTGCAGTGCATTCACAGAATTGTATTCTAATGGAACTGGATGGACATTCTTTCACTGGATTTCCGCGGAAAATTATACTTTTGATAGTACTGGTGAAAACTTTTACTTCCTGGTGGACATGTTAACTAATCATAAGGGTAAAAAAAAGTGGATATGGATAGGTGCAGTAGCAGCAACTGCTCTACTTGCAATTTGCCTATTCACTATTTGCCTAGCCTTAAAGAAACGAAAATTCGTGTTTCAAGGGAAGAAAAGGCAAAGAATGGTGATGAAGATGGTACATTTGGCAACTAGTAGTCGGTCATCTGCAATGGAAGATTTTGAAGTTGATTTAAAAAAGGGAAATGGCCTAAAATTTTTTAATTATACATCAGTTATGGCAGCAACAAATGGATTTTCATCTGAGAATAAGTTAGGACAAGGAGGCTTTGGACCCGTTTATAAGGGAATTCTTCAAACAGGCCAAGAGATTGCTGTAAAAAGACTTTCAAAAACATCTGGGCAAGGAATTGTGGAGTTTAAGAATGAACTAACACTAATATGTGAACTTCAGCATATGAATCTTGTGCAACTACTTGGTTGTTGCATTCATGAAGAAGAGAGGATTCTAATTTATGAGTATATGCCAAATAAAAGTTTGGATTTCTATCTATTCGGTGAGTAA 1194 0.3836 MKLGVNHKTDHHWLLLSFMAKTLVTPGAFSLEWEPVEQELIIRRRGKVCWRSGKLRNNRFEHIPDDAQRRLKYTIVSNGDENSFSFTTTNEEADPWWILSENGQISDGKGYVARADLCYGYNTDGGCQRWQDIPKCRNPGDVFQKKTGYFNDQNTSIEGNISYGYSDCEASCWSNCNCSAFTELYSNGTGWTFFHWISAENYTFDSTGENFYFLVDMLTNHKGKKKWIWIGAVAATALLAICLFTICLALKKRKFVFQGKKRQRMVMKMVHLATSSRSSAMEDFEVDLKKGNGLKFFNYTSVMAATNGFSSENKLGQGGFGPVYKGILQTGQEIAVKRLSKTSGQGIVEFKNELTLICELQHMNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFGE* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00088 397 Gene3D Phosphorylase Kinase; domain 1 266 384 - -
Phacun1g00088 397 SUPERFAMILY Protein kinase-like (PK-like) 294 396 IPR011009 -
Phacun1g00088 397 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 274 384 - -
Phacun1g00088 397 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 394 - -
Phacun1g00088 397 Pfam Protein tyrosine and serine/threonine kinase 312 394 IPR001245 GO:0004672|GO:0006468
Phacun1g00088 397 Pfam PAN-like domain 140 188 IPR003609 -
Phacun1g00088 397 ProSiteProfiles Protein kinase domain profile. 309 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00088 287 397 Receptor kinase-like Gene Family AT4G04500 59.459 5.40e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phacun1g00088 PK_Tyr_Ser-Thr 5.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00088 - - vun:114168194 692.575