Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00080 ATGGCCATTCCACTACCTTTCATCGTCGTAGCCAGCTTATTTTTGCTCTCATCAAAAGTTTCCTCTGAAACCAACACCATCACTCAGTTTCAGCCACTTACCTATGGAACCAACTTGGTTTCTGAGGAAGGAACCTTCGAGTTAGGTTTCTTCAGCCTAGGTACTTCCTCAAACCTCTACCTAGGAATCTGGTTCAAAAAAATCCCACAGAAAACCATTGTTTGGGTTGCCAACCGCAACAATCCAATCAAAAACACCATCATCAACAGCAACAACTCAACCGAGTTAACCTTAACCAAAGAAGGAAACCTGGTTCTTCTCAGCAGCAACAACACCCTCCACTGGTCAACAAATGCAACAGCAAAATCTAAATCGGTGAACCCAGTAGCACGGCTTTTGGAAACAGGGAACTTTGTGGTAAGAGATGAAAAGGACAACAATTCTGAAAACTACTTGTGGCAAAGCTTTGACTATCCTTCGGACACGCTTTTACCAGGAATGAAGCTAGGGTGGGAAGTAACAACAGGTCTCAACAGATACCTCACTTCTTGGAACAATTGGGAAGACCCATCTTCTGGTCATTTTTCTTATGGAGTTTCAAGAGGCAACATCCCCGAAATGCAACTTTGGAACGGTTCATCAGTGTCCTACAGAAGTGGCCCTTGGAGTGGCTTTCGATTCAGCGCCACACCCGCATTGAAGCGCCGTTCATTGATGAATATCAACTTCGTTGACAACCCCATGGAAAGTTATTACCAAGTTTTCCCGCGAAATAGGTCGATGATTCTGAGAACGGTGGTTAACCAAACCATGAACACTCTTCAGCGTTTCATTTGGGACGAAGAAACTCAAAACTGGAAGCTTGATTTAGTTATCCCCAGAGACGGTTTTTGCGGCTATAACTTCTGTGGCTCATTCGGGTACTGTGCTGTGAAGGATAACTCTTCAGCCTGCGAGTGTTTACGAGGGTTTGAGCCAAAATCGGCTGAAAAGTGGAGTGAAAAGAATTGGAGTGAAGGGTGCGTGCATAGAAGTGAAACTAGGTGCAGGGTGAAGAAGAAAGACGGGTTTCTTAAGGTTAGTAACATGAAGATTCCCGACACTAAAACATCGTGGATGAATCGAAGTCTGACGATTGAGGAATGCAAGGCTAAGTGTTGGGAAAATTGTTCTTGCACGGCTTATGCTAATTCGGATATCACTGAAAATGGAAGTGGTTATAGCGGTTGCATCCTCTGGTTCGGTGATCTATTGGATTTGAGATTTCTTCCAGATGCAGGGCAAGATCTATTTGTTAGAATGGATATCTCCAAAATTGAAAATAAAGATAGTTCAAAGAACGTGGTGATTGGGGTCACAAGCATAGTTTCATCAATTGCTGCGGTGCTTCTAATATTCACATTCTTTTACCGGAGAAGAAAAGGCAAAGATACAAAAGCAAAAATAAACGAAAGTGAAGAAGATGATCTTGAGCTACCTTTGTTTGATTTTGATACAATAGCATGTGCTACTAGTGACTTCTCAGATGACAACATGCTTGGTCAAGGTGGTTTTGGTCCTGTCTACAAAGTATGTATGCAACAACCTTCTTCTTCATCAATAGTCAATAAGCTAGAACATAGTTTTACTTTTCTATACCCAATTTTACTTATTTATAAATTTTATATTATTAAGGGAACATTGGACGGAAAGAATATTGCAGTGAAAAGGCTATCTGATACATCTGCCCAAGGACTCGAGGAATTTAAAAATGAAGTTATATTTTGTTCTAAACTTCAACATCGGAATCTTGTCAAAGTTCTTGGATATTGCGTTGAAGAGCAAGAAAAATTACTCATTTATGAATACATGCCTAACAAAAGCTTAAACTTCTTTCTTTTTGGTAAGCGATTTTCATAA 1899 0.4065 MAIPLPFIVVASLFLLSSKVSSETNTITQFQPLTYGTNLVSEEGTFELGFFSLGTSSNLYLGIWFKKIPQKTIVWVANRNNPIKNTIINSNNSTELTLTKEGNLVLLSSNNTLHWSTNATAKSKSVNPVARLLETGNFVVRDEKDNNSENYLWQSFDYPSDTLLPGMKLGWEVTTGLNRYLTSWNNWEDPSSGHFSYGVSRGNIPEMQLWNGSSVSYRSGPWSGFRFSATPALKRRSLMNINFVDNPMESYYQVFPRNRSMILRTVVNQTMNTLQRFIWDEETQNWKLDLVIPRDGFCGYNFCGSFGYCAVKDNSSACECLRGFEPKSAEKWSEKNWSEGCVHRSETRCRVKKKDGFLKVSNMKIPDTKTSWMNRSLTIEECKAKCWENCSCTAYANSDITENGSGYSGCILWFGDLLDLRFLPDAGQDLFVRMDISKIENKDSSKNVVIGVTSIVSSIAAVLLIFTFFYRRRKGKDTKAKINESEEDDLELPLFDFDTIACATSDFSDDNMLGQGGFGPVYKVCMQQPSSSSIVNKLEHSFTFLYPILLIYKFYIIKGTLDGKNIAVKRLSDTSAQGLEEFKNEVIFCSKLQHRNLVKVLGYCVEEQEKLLIYEYMPNKSLNFFLFGKRFS* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00080 632 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 627 - -
Phacun1g00080 632 ProSiteProfiles Bulb-type lectin domain profile. 24 153 IPR001480 -
Phacun1g00080 632 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 190 IPR036426 -
Phacun1g00080 632 Gene3D Phosphorylase Kinase; domain 1 551 617 - -
Phacun1g00080 632 ProSiteProfiles PAN/Apple domain profile. 349 435 IPR003609 -
Phacun1g00080 632 SMART ntp_6 352 434 IPR003609 -
Phacun1g00080 632 Pfam PAN-like domain 349 420 IPR003609 -
Phacun1g00080 632 Pfam S-locus glycoprotein domain 217 328 IPR000858 GO:0048544
Phacun1g00080 632 CDD B_lectin 31 159 IPR001480 -
Phacun1g00080 632 SUPERFAMILY Protein kinase-like (PK-like) 489 630 IPR011009 -
Phacun1g00080 632 SMART blect_4 30 159 IPR001480 -
Phacun1g00080 632 Pfam Protein tyrosine and serine/threonine kinase 514 626 IPR001245 GO:0004672|GO:0006468
Phacun1g00080 632 Gene3D Phosphorylase Kinase; domain 1 467 543 - -
Phacun1g00080 632 ProSiteProfiles Protein kinase domain profile. 507 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00080 632 Pfam D-mannose binding lectin 72 184 IPR001480 -
Phacun1g00080 632 Gene3D - 18 156 IPR036426 -
Phacun1g00080 632 CDD PAN_AP_plant 355 433 - -
Phacun1g00080 632 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 156 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00080 440 627 Receptor kinase-like Gene Family AT4G23190 37.895 2.85e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phacun1g00080 PK_Tyr_Ser-Thr 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00080 - - pvu:PHAVU_011G152100g 1114.75