Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00074 ATGATCCAGATCAACCGTGTTGAGTTCATTCATTCTAAATTGTTTCTGCATCGAGATATCAAACCAGATAATTATCTATTGGGATTAGGAAGGCGTGCAAACCAGGTTTATGCTATTGATTTTGGTTTGGCTAAGAAATACAGAGATAGCTCAACACATCAACATATTCCTTACATGTACGAAGATTTATTGGCATGCATTAAATTTAGTGGCAATGACGCATCCAATGTCAATGGCAGTGAGCCAGTTTCTGCAAGGAGAAAGGTGGATTCTGGCTACAGGGGTGCCATTCTTTTGTGGAATATGAGTACATGA 315 0.3905 MIQINRVEFIHSKLFLHRDIKPDNYLLGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYMYEDLLACIKFSGNDASNVNGSEPVSARRKVDSGYRGAILLWNMST* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00074 104 Gene3D Transferase(Phosphotransferase) domain 1 1 68 - -
Phacun1g00074 104 Pfam Protein kinase domain 7 54 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00074 104 SUPERFAMILY Protein kinase-like (PK-like) 5 60 IPR011009 -
Phacun1g00074 104 PANTHER CASEIN KINASE-RELATED 4 57 - -
Phacun1g00074 104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 15 27 IPR008271 GO:0004672|GO:0006468
Phacun1g00074 104 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00074 1 48 EF-hand Containing Proteins AT3G50530 46.939 2.97e-07 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Phacun1g00074 Pkinase 3.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00074 K02218 - pvu:PHAVU_004G100600g 123.25