Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00071 ATGCCCAAGATATGTTCAACAAACACAGTAATACATACAATTCCCTCAGTAAATGCACATATATTCAATCCAGTTATCACTGGAATCAATCACACTGCAATGACGATTTTCACTCTCACACTTGGTATTTGCACCCTACTTTTTCTCCTTTCAAAAGCTTTCTCAACTGATACGCTTACCCTCTCACAATCTCTCCATGATGGCACCACCTTATCGTCCAAAGATCAAACTTTCGAACTGGGTTTCTTCTCCCTAAGAAACTCCACAAACCGTTACCTAGGAATCTGGTTCAAAAACATCCCAGTAAAAACCATTGTTTGGGTTGCAAACCGTGACCACCCTCTCAAAGACAACTCCACCAAGTTGACCATAACCAACGACGGAAACCTCCTCCTTCACACCAACAACAACACAGTTCACTGGTCAACAAACACAACAACAAAGCCTTTGAGACTACCCATTTTGCAACTCTTAAACACCGGAAACTTAATACTTCGCAACGATGATGACCATAGCAATAATGAAGAGAAGTTCTTGTGGCAAAGCTTTGACTACCCTTGTGACACATTGCTACCAGGAATGAAGCTTGGATGGAACAAAAAAACCGGTCTCAATCGAAGTATTACTGCGTGGAAGAACTGGGATGACCCTTCTGCTGGAAACTTCACATGGGGCATCACATTTGACAGCAACCCTGAAATGGTTCTTTGGAAGGGAACATCTAAGTACCATAGGAGTGGCCCTTGGAATGGTGTTCGGTTCAGTGGTGCATTTGGTGGTTCAAATAGGTTAGCCACTCACCCTCTTTTCGTTTACAAATTGGTCAACAACAACGACGATGAAGTGTACTACTCATACAGATCCATCAACAAGTCCCTGATCTCAATAGTTGTCATGAACCAAACCCTTTTCCGCCGCCAACGGATCATTTGGATCGCCGACAACGGAACTTGGAGGTTGTTCCAAACCGCTCCAAGAGATATCTGTGACACCTACAATCCATGTGGTTCTTATGCGAATTGCATGGTTGATGCATCACCTGTGTGCCAGTGTTTAGAAGGGTTTCAACCGAAGTCTTCAGAGACTATGGAGTTGTCACAAGGGTGTGTGAGAAGTGAACCGTGGAGGTGCAGGGTAGACAGGAGAGATGGATTTAGAAAATTTGTTGGGTTGAAGTATCCTGATACGACACATTCATGGGTTAATAGAAGCATGACACTCGATGAATGCAAGGTAAAGTGTTGGGAAAATTGTTCCTGCACGGCTTATGCAAACTTGGATATAAGAGGATCAGGAAGTGGGTGCTCTATTTGGTTCGGTGATCTTATTGATTTGAAAGTTGTTTCACAAAGTGGGCAATATCTGTATATTCGAATGGCAGATTCAAGGACAGATCCTAAAGATGCCCACAAGAAGAAGGTATTGTTGCTGATAGGTACCACCGTGGCTCCTACTGTTCTTGTGATTCTATTGGCAATCTTCTACTATTACAGGAGAAAAAGGAAGTATGAAGAAGAAAACGTGTCAGTAGTAAAGAATGATAAAGTTGTTGGAGAAGAAGATAGTATGGAACTACCTTTGTTTGATTTTGCTACATTAGTTAATGCTACCAACAACTTCTCAACTGACAACAAACTTGGGCAAGGTGGGTTTGGGCCTGTATACAAGGGTGTATTAGCAGACGGACAAGAAATTGCTGTTAAAAGGCTATCAAGAAGTTCAGGACAAGGATTAACAAAATTTAAGAATGAAGTTATATTGTGTGCCAAACTGCAACACCGAAATCTAGTTAAAGTTCTTGGTTGCTGCATTGAAGCAGAGGAAAAAATGCTTCTCTATGAATATATGCCCAACAGAAGTTTAGATTCATTTCTTTTTGGTCAGTATCCAATGCTTGAAAGACTTAAATTTCTTTCAAAAATCTTCATAAATGAAGACTAA 1941 0.4122 MPKICSTNTVIHTIPSVNAHIFNPVITGINHTAMTIFTLTLGICTLLFLLSKAFSTDTLTLSQSLHDGTTLSSKDQTFELGFFSLRNSTNRYLGIWFKNIPVKTIVWVANRDHPLKDNSTKLTITNDGNLLLHTNNNTVHWSTNTTTKPLRLPILQLLNTGNLILRNDDDHSNNEEKFLWQSFDYPCDTLLPGMKLGWNKKTGLNRSITAWKNWDDPSAGNFTWGITFDSNPEMVLWKGTSKYHRSGPWNGVRFSGAFGGSNRLATHPLFVYKLVNNNDDEVYYSYRSINKSLISIVVMNQTLFRRQRIIWIADNGTWRLFQTAPRDICDTYNPCGSYANCMVDASPVCQCLEGFQPKSSETMELSQGCVRSEPWRCRVDRRDGFRKFVGLKYPDTTHSWVNRSMTLDECKVKCWENCSCTAYANLDIRGSGSGCSIWFGDLIDLKVVSQSGQYLYIRMADSRTDPKDAHKKKVLLLIGTTVAPTVLVILLAIFYYYRRKRKYEEENVSVVKNDKVVGEEDSMELPLFDFATLVNATNNFSTDNKLGQGGFGPVYKGVLADGQEIAVKRLSRSSGQGLTKFKNEVILCAKLQHRNLVKVLGCCIEAEEKMLLYEYMPNRSLDSFLFGQYPMLERLKFLSKIFINED* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00071 646 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 376 459 - -
Phacun1g00071 646 Gene3D Hepatocyte Growth Factor 376 457 - -
Phacun1g00071 646 ProSiteProfiles EGF-like domain profile. 325 361 IPR000742 -
Phacun1g00071 646 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 504 615 - -
Phacun1g00071 646 Pfam Protein tyrosine and serine/threonine kinase 542 628 IPR001245 GO:0004672|GO:0006468
Phacun1g00071 646 SMART blect_4 62 186 IPR001480 -
Phacun1g00071 646 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 52 183 - -
Phacun1g00071 646 SMART ntp_6 380 459 IPR003609 -
Phacun1g00071 646 Pfam S-locus glycoprotein domain 245 359 IPR000858 GO:0048544
Phacun1g00071 646 ProSiteProfiles Protein kinase domain profile. 540 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00071 646 SUPERFAMILY Protein kinase-like (PK-like) 521 630 IPR011009 -
Phacun1g00071 646 CDD B_lectin 62 186 IPR001480 -
Phacun1g00071 646 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 46 625 - -
Phacun1g00071 646 SUPERFAMILY alpha-D-mannose-specific plant lectins 105 217 IPR036426 -
Phacun1g00071 646 Pfam D-mannose binding lectin 104 212 IPR001480 -
Phacun1g00071 646 ProSiteProfiles Bulb-type lectin domain profile. 56 178 IPR001480 -
Phacun1g00071 646 CDD PAN_AP_plant 377 460 - -
Phacun1g00071 646 Gene3D - 52 183 IPR036426 -
Phacun1g00071 646 Gene3D Phosphorylase Kinase; domain 1 514 615 - -
Phacun1g00071 646 ProSiteProfiles PAN/Apple domain profile. 377 460 IPR003609 -
Phacun1g00071 646 Pfam PAN-like domain 377 445 IPR003609 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00071 478 628 Receptor kinase-like Gene Family AT4G04500 49.673 4.34e-39 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phacun1g00071 S_locus_glycop 7.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00071 - - pvu:PHAVU_011G152200g 1227.62