Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00070 ATGGTCTGTTACACTTTTCTGTTTCTTTTTGCCGAACTAATCATGCAGTTCCCTTCAATTTCGTCTACAACTGATACCTTTAACGGGTCGCAGTCCCTTCCTGATGGCACAACCTTGGTGTCTAAAGATGGAACTTTTGAAATGGGTTTCTTCAGTCCAAGCAACAATAACACAACTACAAATCGCTACCTTGGAATATGGTACAAAAGTATCCCAGTTAGAACCGTTGTTTGGGTTGCCAACCGTGAAAACCCAGTTAAGGATAACTCCAGCAAGTTGAGCATAAGCACTCAAGGAAAACTTGTGATCCTCAGCAAGAACAACACTCTTGTTTGGTCAGCAGACACGACAGAAGAAACAAAAGCACAGAGTCTAATTGTTCAGCTTTTGGACTCAGGGAACTTGGTACTAAGAGATGAGAAAGATTCAAATCCACTGAACTTCTTGTGGGAAAGCTTTGACTATCCTTGTGATACTTTTCTTCCAGGTATGAAGATTGGATGGAACCTTAAGAAGGGTCTTAGCTGGAGATTAACCGCGTGGAAGAACTGGGATGACCCTTCTCCAGGGAACTTCAGTTGGGGTATGGAGCTTGGTAACACTCGTGAACTGGTCATGTGGAAAGGTTCTGGTGAGTATTATAGAAGTGGCCCTTGGAATGGTGTTAGATTCAGTGGCAAATACACTCCCCGTTACAACTTAGAATTTAACTCCACTCAGGATGAAGTGTATTATACATACAAGTTTGTCAGCAATTCATTTATTACAAGGGTTGTTTTGAACCAATCCCTTTATTCTCGACAACGCTATAATTGGATTAATGAGAACCAAACTTGGAGTCCTTATTCAGTGGTTCCTAGAGACAAATGTGACAACTACAATGTTTGTGGTCCCTATGGCAATTGTGTTGGGGATGAACCATTGCAGTGCGAGTGTTTAATGGGATTCAAACCAAAATCAGTTCAAAATTATGAGGCATTGGATTCGAGTCAAGCATGTGTGATTAGTGAACCGTGGAGCTGTGGAGCAAAAGACAGAGGTTTTCAAAAATTTAGTGGGTTGAAATTGCCAGATACTACAAGGTCTTGGATTGATCCAAATTTGACACTTGAGAATTGCAAGGCTAAATGCTTGCAAAATTGTTCTTGCATTGCATATGCAAGCTTAGATATAAGAGATGGTAGTGGTTGTATCATTTGGACTGAAGCTTTGGTTGATTTAAGGGTGGCTTCAGTCCCGGGGCTAGATCTATATATTCGCATTACTGCTTCGGAAACAGAAAAGAGAGGCTATAAGAAATTGGTAGCAGTGCTGATTCCACTTATTCTCCTAACTTTTGGGATTGTTTCCATATTCACATATAGTTATTGGCGGAAAAGAAAGCTTAGAGAGAAAACATCAGAAGAAAATATAAATGAAGACCGTGAAGCAGACTTAGAGCTTCCTTTCTTTGATTTTGCTACAATAGTTCGTGCCACCAGCGATTTCTCAAGTGAAAATATGCTTGGCCAAGGTGGTTTTGGACCTGTGTATAGGGGAACACTCGCAAATGGACAAGAGATCGCTGCCAAGAGGCTTTGTAGTAATACTGGACAAGGAATGAAAGAATTCAAGAATGAAGTTATATTGTGTGCCAAACTTCAGCATCGGAATCTTGTAAAGCTTCTTGGTTGTTCCATCCAAGGAGAGGAAAAAGTTTTGGTCTATGAATACATGCCTAATAAAAGCTTAGACTACTTTCTCTTTGATTCTTCCAAAAGAGGACTCCTAAACTGGTCAAAGAGGTTGAACATTATACATGGCATTGCTCGGGGACTACTATATCTTCATCAAGATTCTAGATTAAGAATCATTCATAGAGATATGAAAGCGAGTAATATCCTGTTGGACAATGAGTTGAATCCAAAAATTTCAGATTTTGGTATAGCACGATTGTTTAGTGGAAATCAAACAGAAGGGAATACAAAACAAGTTGTTGGAACATATGGATACATGGCACCAGAATATGCCATTAATGGACTGTTCTCTACCAAATCTGATGTATACAGCTTTGGAGTACTACTCCTAGAGATAGTAAGTGGGAAGAAAAATGGAGGAATTCTGTTTCCAGATCATGGACTTAATTTATTAGGACATGCTTGGAGATTGTGGAAAGAGGAGACTCCTATGCAATTAGTTGATACTTCTTTGGGTGACACCTTTACCATATCAGAAGCATTACGGTGCATTCATGTTGGTCTTCTATGTGTGCAACTACATCCAGATAATAGGCCAAACATGGCATCAGTGATTTTTTTGTTGAGCAGTGAAAATATTTTGCCACAACCAAAGGAACCCGGTTTTCTTATTGATAGGATGAAAACTGGTGGCGAATGTTCAACTAGCAAGGCAATTAAGATTTCCACTACTGAATTAACTATAACCCAGCTGCAGGCTAGGTAG 2442 0.3976 MVCYTFLFLFAELIMQFPSISSTTDTFNGSQSLPDGTTLVSKDGTFEMGFFSPSNNNTTTNRYLGIWYKSIPVRTVVWVANRENPVKDNSSKLSISTQGKLVILSKNNTLVWSADTTEETKAQSLIVQLLDSGNLVLRDEKDSNPLNFLWESFDYPCDTFLPGMKIGWNLKKGLSWRLTAWKNWDDPSPGNFSWGMELGNTRELVMWKGSGEYYRSGPWNGVRFSGKYTPRYNLEFNSTQDEVYYTYKFVSNSFITRVVLNQSLYSRQRYNWINENQTWSPYSVVPRDKCDNYNVCGPYGNCVGDEPLQCECLMGFKPKSVQNYEALDSSQACVISEPWSCGAKDRGFQKFSGLKLPDTTRSWIDPNLTLENCKAKCLQNCSCIAYASLDIRDGSGCIIWTEALVDLRVASVPGLDLYIRITASETEKRGYKKLVAVLIPLILLTFGIVSIFTYSYWRKRKLREKTSEENINEDREADLELPFFDFATIVRATSDFSSENMLGQGGFGPVYRGTLANGQEIAAKRLCSNTGQGMKEFKNEVILCAKLQHRNLVKLLGCSIQGEEKVLVYEYMPNKSLDYFLFDSSKRGLLNWSKRLNIIHGIARGLLYLHQDSRLRIIHRDMKASNILLDNELNPKISDFGIARLFSGNQTEGNTKQVVGTYGYMAPEYAINGLFSTKSDVYSFGVLLLEIVSGKKNGGILFPDHGLNLLGHAWRLWKEETPMQLVDTSLGDTFTISEALRCIHVGLLCVQLHPDNRPNMASVIFLLSSENILPQPKEPGFLIDRMKTGGECSTSKAIKISTTELTITQLQAR* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00070 813 Gene3D - 19 153 IPR036426 -
Phacun1g00070 813 SMART blect_4 30 156 IPR001480 -
Phacun1g00070 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 775 - -
Phacun1g00070 813 Pfam Protein tyrosine and serine/threonine kinase 499 713 IPR001245 GO:0004672|GO:0006468
Phacun1g00070 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Phacun1g00070 813 PIRSF SRK 1 813 IPR024171 GO:0004674
Phacun1g00070 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Phacun1g00070 813 Gene3D Transferase(Phosphotransferase) domain 1 572 774 - -
Phacun1g00070 813 Pfam S-locus glycoprotein domain 214 320 IPR000858 GO:0048544
Phacun1g00070 813 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 758 - -
Phacun1g00070 813 SMART serkin_6 496 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00070 813 CDD PAN_AP_plant 340 421 - -
Phacun1g00070 813 CDD STKc_IRAK 502 764 - -
Phacun1g00070 813 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Phacun1g00070 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 459 571 - -
Phacun1g00070 813 CDD B_lectin 30 156 IPR001480 -
Phacun1g00070 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 153 - -
Phacun1g00070 813 Pfam D-mannose binding lectin 75 182 IPR001480 -
Phacun1g00070 813 Gene3D Hepatocyte Growth Factor 341 417 - -
Phacun1g00070 813 SMART ntp_6 343 421 IPR003609 -
Phacun1g00070 813 Gene3D Phosphorylase Kinase; domain 1 456 571 - -
Phacun1g00070 813 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00070 813 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Phacun1g00070 813 SUPERFAMILY Protein kinase-like (PK-like) 480 769 IPR011009 -
Phacun1g00070 813 Pfam PAN-like domain 341 407 IPR003609 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00070 367 803 Receptor kinase-like Gene Family AT4G23320 48.000 1.32e-130 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phacun1g00070 PK_Tyr_Ser-Thr 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00070 - - cave:132173746 960.674