Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00064 ATGGATATTCTTTCTTCATTGATCTTTGTTGCTTGTGTACTCATCCCTTCTCTCAAATTTTTCATAGCAGCTGATACTATTCGTTTGTCCCAGTCCATTAGTGATGGCATGACCTTGGTTTCCCAAGGTGAAACATTTGAACTCGGTTTCTTCAGTCCTGAGAACTCAAAGAATCGTTATCTTGGAATTTGGTACAAGAATATCACACAGACAGTTGTTTGGGTGGCAAATGGGGCCATCAATGACTCCTCAGGGATCTTAACACTGAACAGCACAGGAAGCCTTGTTCTCAAGCAGCATGACAAGGTTGTGTGGTACACAACAACGTCTGAAAAACAAGCACGGAATCCTGTGGCTCAGCTTTTGGATTCAGGGAACCTTGTGGTAAGAGATGAGAGTGAAACAGACTCAGAAGAAGCCTATCTGTGGCAAAGCTTTGACCACCCTTCAGACACAATATTGCCAGGGATGAAGCTGGGACGGAACATCAGAACTGGTATGGAATGGAGAATGACAGCTTGGAAGAGTTCCAATGATCCTTCCCCAGGAATCTTTTATTGGGGTCTATTGCTTTATAATTATCCTGAGTTTTATCTGATGAAGGGTACAGAAAAATTTGTGAGAATTGGACCATGGAATGGCCTACATTTCAGTGGTATACCAGATCAAAAGCCTAACTCCATTTATGATTTCAACTACATATCCAACAAGGATGAGATATACTACACTTTCAGCCTCAAGAATGATGCTGTGATCTCAAGATTGGTAATGAATCAAACAAGTTATATGACTATTCGGTACGTATGGATGGAAGATGGACAATATTGGAAGTTATATAAATCACTGCCAAAAGACAATTGTGACTATTATGGAATATGTGGAGTCTATGGGACATGCACCATCACAGGCTCTCAAATATGTCAATGCTTATCAGGGTTCAGTCCCAAGTCACCACAAGCATGGAACTCATCTGACTGGTCTGATGGATGTGTACGGAATAAGCCATTAAACTGCACTGAGAAACACAAGGATGGCTTTGTGAAAGTGAAAGGTGTGAAAGTGCCAGATACTACAAATACTTGGGTAGATGAGACATTAAGTCTAGAAGAATGCAGAGAGAAGTGCTCAAATAATTGTTCTTGTATGGCCTATACTAATTCAGACATAAATGGTGAAGGTACTGGTTGTGTCATGTGGTTTGGAGATCTAATTGATATTAGACAGTTTGATAATGATGGGCAGGATCTACATATTCGAATGCATGCTTCAGAAATAGGGAAACAAGAAGGGAACAAGAAAGTGATAATAATAGTTGCTTCCACCATTGTCATCATTTTAGGAGTCATTTTCATTGGTTGCTATCGATTCTACACTGTCCGGCACAGCATAACTGAGTATTCAGACACTGTACATGATGAAAATAGAGAAGGTAGTGAAGATGATCTTGATCTCCCATCACTTGACCTTTCAACAATAGTCACCGCCACCAATAACTTCTCAATAAAAAACAAGATTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAAAAACAGTAAGTGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGCTCTGGACAAGGAATGACAGAGTTCAAGAATGAAGTAAAACTGATAGCAAAACTTCAGCACCGAAATCTTGTTAAGCTTCTCGGTTGTTGCGTTCAGGAACAGGACAGAATGCTAGTCTATGAATACATGACTAACCGTAGTTTGGATTGGTTGATATTTGGTATGAACATTACAAATTTCAAGATTACTTATTCTGGGTTACTTTAG 1803 0.3982 MDILSSLIFVACVLIPSLKFFIAADTIRLSQSISDGMTLVSQGETFELGFFSPENSKNRYLGIWYKNITQTVVWVANGAINDSSGILTLNSTGSLVLKQHDKVVWYTTTSEKQARNPVAQLLDSGNLVVRDESETDSEEAYLWQSFDHPSDTILPGMKLGRNIRTGMEWRMTAWKSSNDPSPGIFYWGLLLYNYPEFYLMKGTEKFVRIGPWNGLHFSGIPDQKPNSIYDFNYISNKDEIYYTFSLKNDAVISRLVMNQTSYMTIRYVWMEDGQYWKLYKSLPKDNCDYYGICGVYGTCTITGSQICQCLSGFSPKSPQAWNSSDWSDGCVRNKPLNCTEKHKDGFVKVKGVKVPDTTNTWVDETLSLEECREKCSNNCSCMAYTNSDINGEGTGCVMWFGDLIDIRQFDNDGQDLHIRMHASEIGKQEGNKKVIIIVASTIVIILGVIFIGCYRFYTVRHSITEYSDTVHDENREGSEDDLDLPSLDLSTIVTATNNFSIKNKIGEGGFGPVYKGKTVSGQEIAVKRLSRSSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCVQEQDRMLVYEYMTNRSLDWLIFGMNITNFKITYSGLL* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00064 600 CDD PAN_AP_plant 335 419 - -
Phacun1g00064 600 ProSiteProfiles Protein kinase domain profile. 499 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00064 600 Gene3D - 20 146 IPR036426 -
Phacun1g00064 600 Gene3D Hepatocyte Growth Factor 337 422 - -
Phacun1g00064 600 CDD B_lectin 30 149 IPR001480 -
Phacun1g00064 600 Pfam D-mannose binding lectin 71 175 IPR001480 -
Phacun1g00064 600 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 574 - -
Phacun1g00064 600 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Phacun1g00064 600 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 584 - -
Phacun1g00064 600 SMART ntp_6 341 420 IPR003609 -
Phacun1g00064 600 ProSiteProfiles Bulb-type lectin domain profile. 24 142 IPR001480 -
Phacun1g00064 600 SMART blect_4 30 149 IPR001480 -
Phacun1g00064 600 Pfam Protein tyrosine and serine/threonine kinase 500 581 IPR001245 GO:0004672|GO:0006468
Phacun1g00064 600 Pfam PAN-like domain 338 406 IPR003609 -
Phacun1g00064 600 SUPERFAMILY Protein kinase-like (PK-like) 484 590 IPR011009 -
Phacun1g00064 600 Gene3D Phosphorylase Kinase; domain 1 462 574 - -
Phacun1g00064 600 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Phacun1g00064 600 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 146 - -
Phacun1g00064 600 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Phacun1g00064 600 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00064 429 585 Receptor kinase-like Gene Family AT4G04500 50.955 1.48e-36 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phacun1g00064 S_locus_glycop 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00064 - - gmx:100775648 1001.5