Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00062 ATGGATATTCTTTCTTCATTGATCTTTGTTGCTTGTGTACTCATCCCTTCTCTCAAATTTTTCATAGCAGCTGATACTATTCGTTTGTCCCAGTCCATTAGTGATGGCATGACCTTGGTTTCCCAAGGTGAAACATTTGAACTCGGTTTCTTCAGTCCTGAGAACTCAAAGAATCGTTATCTTGGAATTTGGTACAAGAATATCACACAGACAGTTGTTTGGGTGGCAAATGGGGCCATCAATGACTCCTCAGGGATCTTAACACTGAACAGCACAGGAAGCCTTGTTCTCAAGCAGCATGACAAGGTTGTGTGGTACACAACAACGTCTGAAAAACAAGCACGGAATCCTGTGGCTCAGCTTTTGGATTCAGGGAACCTTGTGGTAAGAGATGAGAGTGAAACAGACTCAGAAGAAGCCTATCTGTGGCAAAGCTTTGACCACCCTTCAGACACAATATTGCCAGGGATGAAGCTGGGACGGAACATCAGAACTGGTATGGAATGGAGAATGACAGCTTGGAAGAGTTCCAATGATCCTTCCCCAGGAATCTTTTATTGGGGTCTATTGCTTTATAATTATCCTGAGTTTTATCTGATGAAGGGTACAGAAAAATTTGTGAGAATTGGACCATGGAATGGCCTACATTTCAGTGGTATACCAGATCAAAAGCCTAACTCCATTTATGATTTCAACTACATATCCAACAAGGATGAGATATACTACACTTTCAGCCTCAAGAATGATGCTGTGATCTCAAGATTGGTAATGAATCAAACAAGTTATATGACTATTCGGTACGTATGGATGGAAGATGGACAATATTGGAAGTTATATAAATCACTGCCAAAAGACAATTGTGACTATTATGGAATATGTGGAGTCTATGGGACATGCACCATCACAGGCTCTCAAATATGTCAATGCTTATCAGGGTTCAGTCCCAAGTCACCACAAGCATGGAACTCATCTGACTGGTCTGATGGATGTGTACGGAATAAGCCATTAAACTGCACTGAGAAACACAAGGATGGCTTTGTGAAAGTGAAAGGTGTGAAAGTGCCAGATACTACAAATACTTGGGTAGATGAGACATTAAGTCTAGAAGAATGCAGAGAGAAGTGCTCAAATAATTGTTCTTGTATGGCCTATACTAATTCAGACATAAATGGTGAAGGTACTGGTTGTGTCATGTGGTTTGGAGATCTAATTGATATTAGACAGTTTGATAATGATGGGCAGGATCTACATATTCGAATGCATGCTTCAGAAATAGGGAAACAAGAAGGGAACAAGAAAGTGATAATAATAGTTGCTTCCACCATTGTCATCATTTTAGGAGTCATTTTCATTGGTTGCTATCGATTCTACACTGTCCGGCACAGCATAACTGGTAAAAAGTATTCAGACACTGTACATGATGAAAATAGAGAAGGTAGTGAAGATGATCTTGATCTCCCATCACTTGACCTTTCAACAATAGTCACCGCCACCAATAACTTCTCAATAAAAAACAAGATTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAAAAACAGTAAGTGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGCTCTGGACAAGGAATGACAGAGTTCAAGAATGAAGTAAAACTGATAGCAAAACTTCAGCACCGAAATCTTGTTAAGCTTCTCGGTTGTTGCGTTCAGGAACAGGACAGAATGCTAGTCTATGAATACATGACTAACCGTAGTTTGGATTGGTTGATATTTGATGATACTAAAAGCAAAATGCTAGATTGGCCTAAGCGCTTCAACATTATCTGTGGAATTGCCCGAGGTCTTCTTTATCTTCATCAGGATTCTAGATTGAGGATAATTCATAGAGATCTCAAAGCAAGTAATGTTTTGCTGGATGACCAGATGAATCCAAAAATATCAGATTTTGGCATTGCTAGAATTTTTGGAGGAGATCAGACAGAAGGAAACACAAAGCGAGTAGCAGGAACTTATGGCTACATGTCACCAGAATATGCAGCAGATGGTCTTTTTTCTATGAAATCTGATGTTTTCAGTTTTGGTATTTTGCTGCTGGAGATTATAAGTGGAAAGAGAAATAGAGGTTTCTATCTTGAAAACCAATATCCTAACCTTGTAACTCATGCATGGAGTCTATGGCAAGAGGGTAGGGCTAAAGAGATGGTTGACTCAAGCATTGAGGACTCATGTGTTTTATCAGAGGTTTTGCGTTGCATCCATGTGAGTCTCTTATGTGTCCAACAATATGCAGAGGATAGACCTGTAATGTCTGCTGTGGTTCTAATGCTGGGGAGTGAGAGTGAATTGGCTGAGCCAAAAGAACCTGGTTTCTATATAAAGAATGATCAAGTTGCAACAACTACTACCTCACGAAGAACTGTCTCAACCAATGAAATAACTATCACATTGCTAGAAGCTAGATGA 2451 0.3982 MDILSSLIFVACVLIPSLKFFIAADTIRLSQSISDGMTLVSQGETFELGFFSPENSKNRYLGIWYKNITQTVVWVANGAINDSSGILTLNSTGSLVLKQHDKVVWYTTTSEKQARNPVAQLLDSGNLVVRDESETDSEEAYLWQSFDHPSDTILPGMKLGRNIRTGMEWRMTAWKSSNDPSPGIFYWGLLLYNYPEFYLMKGTEKFVRIGPWNGLHFSGIPDQKPNSIYDFNYISNKDEIYYTFSLKNDAVISRLVMNQTSYMTIRYVWMEDGQYWKLYKSLPKDNCDYYGICGVYGTCTITGSQICQCLSGFSPKSPQAWNSSDWSDGCVRNKPLNCTEKHKDGFVKVKGVKVPDTTNTWVDETLSLEECREKCSNNCSCMAYTNSDINGEGTGCVMWFGDLIDIRQFDNDGQDLHIRMHASEIGKQEGNKKVIIIVASTIVIILGVIFIGCYRFYTVRHSITGKKYSDTVHDENREGSEDDLDLPSLDLSTIVTATNNFSIKNKIGEGGFGPVYKGKTVSGQEIAVKRLSRSSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCVQEQDRMLVYEYMTNRSLDWLIFDDTKSKMLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDQMNPKISDFGIARIFGGDQTEGNTKRVAGTYGYMSPEYAADGLFSMKSDVFSFGILLLEIISGKRNRGFYLENQYPNLVTHAWSLWQEGRAKEMVDSSIEDSCVLSEVLRCIHVSLLCVQQYAEDRPVMSAVVLMLGSESELAEPKEPGFYIKNDQVATTTTSRRTVSTNEITITLLEAR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00062 816 CDD PAN_AP_plant 335 419 - -
Phacun1g00062 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 146 - -
Phacun1g00062 816 Gene3D - 20 146 IPR036426 -
Phacun1g00062 816 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Phacun1g00062 816 ProSiteProfiles Bulb-type lectin domain profile. 24 142 IPR001480 -
Phacun1g00062 816 SMART blect_4 30 149 IPR001480 -
Phacun1g00062 816 Gene3D Hepatocyte Growth Factor 337 422 - -
Phacun1g00062 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Phacun1g00062 816 Pfam PAN-like domain 338 406 IPR003609 -
Phacun1g00062 816 Gene3D Phosphorylase Kinase; domain 1 463 576 - -
Phacun1g00062 816 Gene3D Transferase(Phosphotransferase) domain 1 577 788 - -
Phacun1g00062 816 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Phacun1g00062 816 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Phacun1g00062 816 Pfam Protein tyrosine and serine/threonine kinase 502 769 IPR001245 GO:0004672|GO:0006468
Phacun1g00062 816 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00062 816 CDD B_lectin 30 149 IPR001480 -
Phacun1g00062 816 CDD STKc_IRAK 507 772 - -
Phacun1g00062 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Phacun1g00062 816 Pfam D-mannose binding lectin 71 175 IPR001480 -
Phacun1g00062 816 SUPERFAMILY Protein kinase-like (PK-like) 487 772 IPR011009 -
Phacun1g00062 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Phacun1g00062 816 SMART ntp_6 341 420 IPR003609 -
Phacun1g00062 816 SMART serkin_6 501 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00062 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 576 - -
Phacun1g00062 816 Pfam Domain of unknown function (DUF3403) 775 816 IPR021820 GO:0004674
Phacun1g00062 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Phacun1g00062 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 763 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00062 431 790 Receptor kinase-like Gene Family AT4G23230 53.444 7.66e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phacun1g00062 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00062 - - gmx:100775648 1383.62