Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00050 ATGGACATTCTTACGTTCGTGATTTTATTTGCATGCATACTTGTTCCCTCTCTCAAGATTTCCGTAGCAGATGATTCTATCAATGTGCCGCAATCGATGAGTGATGGAGAAACCTTGGTGTCAAAAGGTGGAAACTTTGAACTTGGGTTTTTCAGCACAAGTGATTCCCAGAAACGTTACGTGGGCATTTGGTTCAAAAAGGTCCCAGTTCAGACAATTGTTTGGGTTGCTAATGGGGCCAACCCCATCAATGATTCCTCAGGAATCTTAACACTGAACACCACAGGCAATCTTGTTCTCACCCAAAATGGGTCTCTTGTTTGGCGCACCATCTCTGGCAAACTAGCACAGAATCCAGTGGCAGTGCTCTTGGACAGTGGCAATCTTGTGGTAAGAAATGAAGGAGAAACAAACCCTGAGGAGTATTTGTGGCAAAGCTTTGATCATCCATCAAATACACTCTTACCAGGGATGAAGGTGGGGTGGAACCTCCGAACAGGTCTGGAACGGAAAATAACATCTTGGAAAAGTCCAGATGATCCATCCCCAGGTGACATTTCATGGAGTTTAAAACCCTATAATTATCCTGAGATTTATCTAATGCAGGGAACAAAAAAGTTGTATCGGCAGGGACCTTGGAATGGCCTCTTTTATAGTGGAATACCAGATCTACAGAATAACACTATTTTCGGATTCAATTCTGTGCATGATAACGATGAGATTTTCGGTAGCTTTACCCTTGTAAACACTTCTGTACTCTCCATAGGTGTAATATACCAAACAGGTAGATCTACTAACCTTGTATGGGTCGAGGGTGATCCAAATTGGAGGATATACATGTCACTACCGAAAGACTTTTGTGATTCTTATGGCATCTGTGGAGCCTATGGGAAATGCATGAGTACGCTGACGCAAGTGTGCCAATGTTTGAAAGGGTTTAGTCCAAAGTCACCACTAGCGTGGAGTTCATCTGACTGGAGTGAAGGATGTGTCCGCAATAAACCTTTGAGTTGCAACGGTGAAGAGAAAGATGGGTTTGTCAGATTTAAAATGCTCAAAGTTCCTGATACTGCACACACTTGGTTGGATGCAAGTATTGGTTTAGGGGAGTGCAGAGAGAAGTGCTTGAACAATTGTTCTTGTATGGCCTATGCTAATTCAGACATAAGAGGTGCAGGTAGCGGTTGTGTCATGTGGTTTGAGGATCTCATTGACTTGAAGCAGATTCAAACTGGTGGGCAAGATCTATACATCAGAATGTCTGCTTCAGAGTTAGAACACAAGAACAACAAGCCAACGATAGTTGCTTCTACAGTTGCTGCAATTTGTGTGGTTCTGATACTTTGTTCCTATTTTATCTACAGAATTCACAGGAATAAAGCTGAGAAAGATAAGATCAAGAATGATGAAATTAGTGTACCAACATTTAATTTTTCATATATATCCAATGCCACAAATCATTTTTCACAAAACAACAAATTGGGACAAGGTGGCTTTGGAGCAGTGTACAAGGGAATATTGCCAAATGGGCAAGAGATTGCAGTTAAGAGACATTCCCAAACTTCTGCACAAGGTCTAGACGAATTAAAAAATGAAGTTATGTTGATCGCAAAACTTCAACATCGTAATCTTGTGACACTACTTGGTTGGTCTATTCATCAAAATGAGAAATTGTTGATTTATGAATTCATGACTAATGGAAGCTTAGACTCCTTTATTTTCGATTCATCAAGACGTGCACTATTAGGTTGGACGAAGCTGCTTGAAATTATTGGTGGAATTGCACGAGGACTTCTCTATCTTCATCATGATTCTAGACTAAAAATTATTCACAGGGATCTCAAAGCTAGTAATATTCTTCTTGATAGTAATATGATTCCAAAAATATCAGACTTTGGTATTGCTAGAACATTTGGACTTGATCAGGATGAAGCAAATACAAATAGATTAATGGGAACATAG 1962 0.4006 MDILTFVILFACILVPSLKISVADDSINVPQSMSDGETLVSKGGNFELGFFSTSDSQKRYVGIWFKKVPVQTIVWVANGANPINDSSGILTLNTTGNLVLTQNGSLVWRTISGKLAQNPVAVLLDSGNLVVRNEGETNPEEYLWQSFDHPSNTLLPGMKVGWNLRTGLERKITSWKSPDDPSPGDISWSLKPYNYPEIYLMQGTKKLYRQGPWNGLFYSGIPDLQNNTIFGFNSVHDNDEIFGSFTLVNTSVLSIGVIYQTGRSTNLVWVEGDPNWRIYMSLPKDFCDSYGICGAYGKCMSTLTQVCQCLKGFSPKSPLAWSSSDWSEGCVRNKPLSCNGEEKDGFVRFKMLKVPDTAHTWLDASIGLGECREKCLNNCSCMAYANSDIRGAGSGCVMWFEDLIDLKQIQTGGQDLYIRMSASELEHKNNKPTIVASTVAAICVVLILCSYFIYRIHRNKAEKDKIKNDEISVPTFNFSYISNATNHFSQNNKLGQGGFGAVYKGILPNGQEIAVKRHSQTSAQGLDELKNEVMLIAKLQHRNLVTLLGWSIHQNEKLLIYEFMTNGSLDSFIFDSSRRALLGWTKLLEIIGGIARGLLYLHHDSRLKIIHRDLKASNILLDSNMIPKISDFGIARTFGLDQDEANTNRLMGT* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00050 653 SUPERFAMILY Protein kinase-like (PK-like) 468 653 IPR011009 -
Phacun1g00050 653 CDD PAN_AP_plant 335 419 - -
Phacun1g00050 653 Pfam D-mannose binding lectin 72 176 IPR001480 -
Phacun1g00050 653 ProSiteProfiles Protein kinase domain profile. 488 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00050 653 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Phacun1g00050 653 SMART serkin_6 488 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00050 653 SMART ntp_6 341 420 IPR003609 -
Phacun1g00050 653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 453 563 - -
Phacun1g00050 653 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 647 - -
Phacun1g00050 653 Gene3D - 19 148 IPR036426 -
Phacun1g00050 653 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Phacun1g00050 653 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Phacun1g00050 653 SMART blect_4 30 150 IPR001480 -
Phacun1g00050 653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 564 653 - -
Phacun1g00050 653 Gene3D Phosphorylase Kinase; domain 1 450 563 - -
Phacun1g00050 653 Pfam Protein tyrosine and serine/threonine kinase 490 643 IPR001245 GO:0004672|GO:0006468
Phacun1g00050 653 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Phacun1g00050 653 Gene3D Transferase(Phosphotransferase) domain 1 564 653 - -
Phacun1g00050 653 Pfam PAN-like domain 338 406 IPR003609 -
Phacun1g00050 653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
Phacun1g00050 653 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Phacun1g00050 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Phacun1g00050 653 CDD B_lectin 31 150 IPR001480 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00050 430 653 Receptor kinase-like Gene Family AT4G23230 53.275 4.84e-73 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phacun1g00050 PK_Tyr_Ser-Thr 1.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00050 - - pvu:PHAVU_011G153500g 1103.97