Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00048 ATGGACATTCTTACGTTCGTGATTTTATTTGCATGCATACTTGTTCCCTCTCTCAAGATTTCCGTAGCAGATGATTCTATCAATGTGCCGCAATCGATGAGTGATGGAGAAACCTTGGTGTCAAAAGGTGGAAACTTTGAACTTGGGTTTTTCAGCACAAGTGATTCCCAGAAACGTTACGTGGGCATTTGGTTCAAAAAGGTCCCAGTTCAGACAATTGTTTGGGTTGCTAATGGGGCCAACCCCATCAATGATTCCTCAGGAATCTTAACACTGAACACCACAGGCAATCTTGTTCTCACCCAAAATGGGTCTCTTGTTTGGCGCACCATCTCTGGCAAACTAGCACAGAATCCAGTGGCAGTGCTCTTGGACAGTGGCAATCTTGTGGTAAGAAATGAAGGAGAAACAAACCCTGAGGAGTATTTGTGGCAAAGCTTTGATCATCCATCAAATACACTCTTACCAGGGATGAAGGTGGGGTGGAACCTCCGAACAGGTCTGGAACGGAAAATAACATCTTGGAAAAGTCCAGATGATCCATCCCCAGGTGACATTTCATGGAGTTTAAAACCCTATAATTATCCTGAGATTTATCTAATGCAGGGAACAAAAAAGTTGTATCGGCAGGGACCTTGGAATGGCCTCTTTTATAGTGGAATACCAGATCTACAGAATAACACTATTTTCGGATTCAATTCTGTGCATGATAACGATGAGATTTTCGGTAGCTTTACCCTTGTAAACACTTCTGTACTCTCCATAGGTGTAATATACCAAACAGGTAGATCTACTAACCTTGTATGGGTCGAGGGTGATCCAAATTGGAGGATATACATGTCACTACCGAAAGACTTTTGTGATTCTTATGGCATCTGTGGAGCCTATGGGAAATGCATGAGTACGCTGACGCAAGTGTGCCAATGTTTGAAAGGGTTTAGTCCAAAGTCACCACTAGCGTGGAGTTCATCTGACTGGAGTGAAGGATGTGTCCGCAATAAACCTTTGAGTTGCAACGGTGAAGAGAAAGATGGGTTTGTCAGATTTAAAATGCTCAAAGTTCCTGATACTGCACACACTTGGTTGGATGCAAGTATTGGTTTAGGGGAGTGCAGAGAGAAGTGCTTGAACAATTGTTCTTGTATGGCCTATGCTAATTCAGACATAAGAGGTGCAGGTAGCGGTTGTGTCATGTGGTTTGAGGATCTCATTGACTTGAAGCAGATTCAAACTGGTGGGCAAGATCTATACATCAGAATGTCTGCTTCAGAGTTAGAACACAAGAACAACAAGCCAACGATAGTTGCTTCTACAGTTGCTGCAATTTGTGTGGTTCTGATACTTTGTTCCTATTTTATCTACAGAATTCACAGGAATAAAGCTGAGAAAGATAAGATCAAGAATGATGAAATTAGTGTACCAACATTTAATTTTTCATATATATCCAATGCCACAAATCATTTTTCACAAAACAACAAATTGGGACAAGGTGGCTTTGGAGCAGTGTACAAGGGAATATTGCCAAATGGGCAAGAGATTGCAGTTAAGAGACATTCCCAAACTTCTGCACAAGGTCTAGACGAATTAAAAAATGAAGTTATGTTGATCGCAAAACTTCAACATCGTAATCTTGTGACACTACTTGGTTGGTCTATTCATCAAAATGAGAAATTGTTGATTTATGAATTCATGACTAATGGAAGCTTAGACTCCTTTATTTTCGATTCATCAAGACGTGCACTATTAGGTTGGACGAAGCTGCTTGAAATTATTGGTGGAATTGCACGAGGACTTCTCTATCTTCATCATGATTCTAGACTAAAAATTATTCACAGGGATCTCAAAGCTAGTAATATTCTTCTTGATAGTAATATGATTCCAAAAATATCAGACTTTGGTATTGCTAGAACATTTGGACTTGATCAGGATGAAGCAAATACAAATAGATTAATGGGAACATATGGTTATATGGCTCCTGAATATGCTGTGCATGGATATTTCTCAGTCAAATCTGATGTCTTTGCCTTTGGTGTTATTGTGTTAGAGATAATTAGTGGAAGAAAGAATAGAGGATTTTGTGATCCAGATCATCATCTAAATCTTCTTGGACATGCATGGAGACTTTGGATTGAAAAAAATCCAATAGAACTTATGGATGACTTGGTAGATGGATTCGTGGATCCTTCAAACATATTAAGGTATATTCATATTGCTTTATTATGTGTACAAGAAAGACCAGAAGATAGGCCAAATATGTCATCAGTGGTTTTAATGTTGAATGGTGAGAAGATATTGTCTGAGCCAAGTCAACCTGGATTCTACACAGGAAAAGATCATTCAACAATCACAAATTCTTTTCCAATAAACTTTTATGTGAATTCTCCCAATGAAATGTCTAACTCAATGTTGGAGGCAAGATGA 2421 0.3907 MDILTFVILFACILVPSLKISVADDSINVPQSMSDGETLVSKGGNFELGFFSTSDSQKRYVGIWFKKVPVQTIVWVANGANPINDSSGILTLNTTGNLVLTQNGSLVWRTISGKLAQNPVAVLLDSGNLVVRNEGETNPEEYLWQSFDHPSNTLLPGMKVGWNLRTGLERKITSWKSPDDPSPGDISWSLKPYNYPEIYLMQGTKKLYRQGPWNGLFYSGIPDLQNNTIFGFNSVHDNDEIFGSFTLVNTSVLSIGVIYQTGRSTNLVWVEGDPNWRIYMSLPKDFCDSYGICGAYGKCMSTLTQVCQCLKGFSPKSPLAWSSSDWSEGCVRNKPLSCNGEEKDGFVRFKMLKVPDTAHTWLDASIGLGECREKCLNNCSCMAYANSDIRGAGSGCVMWFEDLIDLKQIQTGGQDLYIRMSASELEHKNNKPTIVASTVAAICVVLILCSYFIYRIHRNKAEKDKIKNDEISVPTFNFSYISNATNHFSQNNKLGQGGFGAVYKGILPNGQEIAVKRHSQTSAQGLDELKNEVMLIAKLQHRNLVTLLGWSIHQNEKLLIYEFMTNGSLDSFIFDSSRRALLGWTKLLEIIGGIARGLLYLHHDSRLKIIHRDLKASNILLDSNMIPKISDFGIARTFGLDQDEANTNRLMGTYGYMAPEYAVHGYFSVKSDVFAFGVIVLEIISGRKNRGFCDPDHHLNLLGHAWRLWIEKNPIELMDDLVDGFVDPSNILRYIHIALLCVQERPEDRPNMSSVVLMLNGEKILSEPSQPGFYTGKDHSTITNSFPINFYVNSPNEMSNSMLEAR* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00048 806 CDD PAN_AP_plant 335 419 - -
Phacun1g00048 806 ProSiteProfiles Protein kinase domain profile. 488 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00048 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Phacun1g00048 806 SMART serkin_6 488 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun1g00048 806 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Phacun1g00048 806 SMART ntp_6 341 420 IPR003609 -
Phacun1g00048 806 Gene3D Transferase(Phosphotransferase) domain 1 564 770 - -
Phacun1g00048 806 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Phacun1g00048 806 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 746 - -
Phacun1g00048 806 Pfam Protein tyrosine and serine/threonine kinase 490 757 IPR001245 GO:0004672|GO:0006468
Phacun1g00048 806 PIRSF SRK 1 806 IPR024171 GO:0004674
Phacun1g00048 806 Gene3D - 19 148 IPR036426 -
Phacun1g00048 806 SMART blect_4 30 150 IPR001480 -
Phacun1g00048 806 Pfam D-mannose binding lectin 72 176 IPR001480 -
Phacun1g00048 806 Pfam PAN-like domain 338 406 IPR003609 -
Phacun1g00048 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 453 563 - -
Phacun1g00048 806 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Phacun1g00048 806 Gene3D Phosphorylase Kinase; domain 1 450 563 - -
Phacun1g00048 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 564 767 - -
Phacun1g00048 806 SUPERFAMILY Protein kinase-like (PK-like) 468 759 IPR011009 -
Phacun1g00048 806 CDD STKc_IRAK 494 761 - -
Phacun1g00048 806 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Phacun1g00048 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
Phacun1g00048 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Phacun1g00048 806 CDD B_lectin 31 150 IPR001480 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00048 430 773 Receptor kinase-like Gene Family AT4G23230 52.857 1.52e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phacun1g00048 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00048 - - gmx:100801916 1238.79