Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun1g00020 ATGGTGTTATCGGCTTCGCCATGTTCCTTGACGAGAAGCTCACTGGAGGAGATGCTGGATTCACTTCGGCGGAGGGACGAGGAGGAGGAGAAGAAGAAGGACTTGCCACCGGCGTTGCCCGCCAGGCCGGCCTCACGTGCAAGGCTTCCTCCGGCACGGCGGTCGCTGCCGAATGATTTTAAGGTTAGCGGCAGCGAGCGCCATGTCGTGCCGGAGAACGGAGTTTCTACTAATGAGGAGAGTGATTTGGAGCAGGAGAGGAGAAGGTGTGGTTTTGGGAGCAAGAGGCTGAAGAAGGATGTGGATTCTCCCTATGTGACACTTTCTTCCAGTGATTCATCAGGGAAGGTTTGGGAATTGGAGGATGATGATAGCATATCTTATTTCATCAATAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAACTGGGAATGATACAGTCAACTTCAGGAGAGGAAGCGTTCGTTTCACTCTCAAATGGAAATGTTATGAAAGTGGGCAGATCAGAGATTCTACCAGCAAATCCTGATGTTTTGGAAGATGTGGATGATCTAATTAAACTTGGTTATTTGAATGAGCCATCGGTTCTTCACAATCTTAAATTAAGATATTCTCAAGGGATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAGATCTTCAGATGAATGGAAATGATTATGTCTCAGCTCGTAGCCAGAGAACTATGAATAGTCCTCATGTTTATGCTATAGCAGATGCAGCTTATAACAAGATGATTAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCACTGCAATACTTAGCTGCTCTTGGTGGTGGTGGTAATTGTGCCATAGAAAATGAATTTCTTCAGATAAATTGTATTCTAGAGGCTTTTGGGAATGCGAAAACATCTAGAAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTCACTTTGGCTGCACGGGTAAAATATGTGGGGCTAAAATTCAAACCTTATTGTTGGAAAAGTCTAGAGTTGTTCAACTGGCCCGTGATGAGAGATCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAAACTGAATCTTAGAGCAGTAAGTGAATATAAATATCTAGTTCAGAGTGATTGCATGTCAGTTGATGGTGTTGATGATGCCAAAAACTTTGATCAGCTGATGGAAGCACTGGATGCAGTTCGAATTTGTAAAGAGGATCAGGAGCTGATATTTAAGATACTTGCTGCAATACTATGGTTGGGAAATATATCATTCCAAGTAGACAGAGAAAATCACATTGAGGTTGTTGAGGATGAAGCTGTAACCAGTGCTGCCCAGCTGATGGGTTGCACTTCCCAGGATTTAATGACAGCATTGTGTATACATAACATCCAAGCTGATGAAGATACTATTGCCAAAACTTTGACGTTGAGTCAGGCAATTGAAAGAAGAGATGCCATTGCAAAATTTATCTATGCAAGCTTGTTTAATTGGCTCTTAGACCAAGTTAACAAGTCACTTGAAGTGGGTAAAAAATGTACTGGGAAATCCATAAGTATCCTCGATCTTTATGGGTTTCAGACTTTCCAGAAGAACAGCTTTGAGCAGTTTTACATAAATTATGCCAATGAAAGGATTCAACAACATTATAATCGCCACCTGTTTAAACTAGAGCAGGAGGACTATGAATTGGATGGCATTGATTGGACTAAAGTAGATTTTGAGGACAATCAAGGGTGCTTGGATCTATTTGAGAAGAAACCTCAAGGTCTACTCTCTTTGTTGGATGAGGAGTCAAATTTACCAAACGCTTCTGATTTAACATTTGCCAACAAACTTAAGCATCACTTGCACCCTAATCCTTGCTTCAAAGGGGAAAGAGGAAGAGCTTTCCATGTTCGTCACTATGCAGGAGAGGTTCTGTATGATACAAATGGCTTTTTAGAAAAGAACAGAGACACGATGTCTTCTGACTGCATTCAGTTCCTGTCATCATGTAATTGTAAACTGCTGCAGCTGTTCTCCAAAATGTTTAACCAGTCTCAAAAGCAGAGTGTTGCAACGAAATTCAAGGTTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCATGCCTCACTTTATTCGCTGCATAGCACCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAAGTCTTGTCCTACAACAGCTCAGGTGTTGTGGAGTTCCAGAAGTCGTTAGACTTTCAAGGGCTGGATATCCTACTCGAATGACCCATCTAGAGTTTTCTAGAAGGTATGCGTTTATGCTTTCTGAGACCAACGTATCGAATGATCCATTGAGCATCTCAGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGGGCAGATTGACGCACTGGAGAATACGAGAAAACAGATTTTGCAGGCAATACTAGGGATTCAAAAATGTTTCCGTGGTCATCAAGCACGTGGTTGGTTCTGTGAACTTAAGAATGGAGTGACAACACTACAATCATTTATTCGTGGAGAAAATTCAAGAAGGAAATATGGTGTCACGGCGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGATGCTAGTCATGTAAATAGGTCAAAGAAATATCCTGAAAATGCCAAACCTAGGCGGAAGTCCTTCATGAAGATAATACCAGAAGTACAGGTGTTTTATTGCGTAAAAATGAAACTTTTCCTATTCTTATTTATTCTATCAGACTAA 2907 0.4073 MVLSASPCSLTRSSLEEMLDSLRRRDEEEEKKKDLPPALPARPASRARLPPARRSLPNDFKVSGSERHVVPENGVSTNEESDLEQERRRCGFGSKRLKKDVDSPYVTLSSSDSSGKVWELEDDDSISYFINKKLRVWCRQPRGQWELGMIQSTSGEEAFVSLSNGNVMKVGRSEILPANPDVLEDVDDLIKLGYLNEPSVLHNLKLRYSQGMIYSKAGPILIALNPFKDLQMNGNDYVSARSQRTMNSPHVYAIADAAYNKMIRDEVNQSIIISGESGSGKTETAKIALQYLAALGGGGNCAIENEFLQINCILEAFGNAKTSRNNNSSRFGKLIEIHFGCTGKICGAKIQTLLLEKSRVVQLARDERSYHIFYQLCAGSSSDLKEKLNLRAVSEYKYLVQSDCMSVDGVDDAKNFDQLMEALDAVRICKEDQELIFKILAAILWLGNISFQVDRENHIEVVEDEAVTSAAQLMGCTSQDLMTALCIHNIQADEDTIAKTLTLSQAIERRDAIAKFIYASLFNWLLDQVNKSLEVGKKCTGKSISILDLYGFQTFQKNSFEQFYINYANERIQQHYNRHLFKLEQEDYELDGIDWTKVDFEDNQGCLDLFEKKPQGLLSLLDEESNLPNASDLTFANKLKHHLHPNPCFKGERGRAFHVRHYAGEVLYDTNGFLEKNRDTMSSDCIQFLSSCNCKLLQLFSKMFNQSQKQSVATKFKVQLFKLMHQLESTMPHFIRCIAPNTKQLPGIYDESLVLQQLRCCGVPEVVRLSRAGYPTRMTHLEFSRRYAFMLSETNVSNDPLSISVAVLQKFNIPSEMYHVGYTKLYLRAGQIDALENTRKQILQAILGIQKCFRGHQARGWFCELKNGVTTLQSFIRGENSRRKYGVTAKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDASHVNRSKKYPENAKPRRKSFMKIIPEVQVFYCVKMKLFLFLFILSD* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun1g00020 968 Gene3D - 774 841 - -
Phacun1g00020 968 PANTHER MYOSIN 177 934 - -
Phacun1g00020 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 922 IPR027417 -
Phacun1g00020 968 SMART iq_5 901 923 IPR000048 GO:0005515
Phacun1g00020 968 SMART iq_5 841 863 IPR000048 GO:0005515
Phacun1g00020 968 SMART iq_5 864 886 IPR000048 GO:0005515
Phacun1g00020 968 ProSiteProfiles IQ motif profile. 844 871 IPR000048 GO:0005515
Phacun1g00020 968 Gene3D Kinesin motor domain 183 773 IPR036961 -
Phacun1g00020 968 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 131 180 IPR004009 GO:0003774|GO:0005524|GO:0016459
Phacun1g00020 968 Coils Coil 12 32 - -
Phacun1g00020 968 CDD MYSc_Myo8 198 828 IPR036022 -
Phacun1g00020 968 Gene3D - 555 730 - -
Phacun1g00020 968 ProSiteProfiles IQ motif profile. 865 894 IPR000048 GO:0005515
Phacun1g00020 968 MobiDBLite consensus disorder prediction 17 37 - -
Phacun1g00020 968 SMART MYSc_2a 178 841 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phacun1g00020 968 Gene3D - 368 424 - -
Phacun1g00020 968 ProSiteProfiles IQ motif profile. 902 930 IPR000048 GO:0005515
Phacun1g00020 968 FunFam Myosin heavy chain 368 424 - -
Phacun1g00020 968 Gene3D - 842 891 - -
Phacun1g00020 968 ProSiteProfiles Myosin motor domain profile. 184 840 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phacun1g00020 968 Pfam IQ calmodulin-binding motif 844 859 IPR000048 GO:0005515
Phacun1g00020 968 Pfam IQ calmodulin-binding motif 869 885 IPR000048 GO:0005515
Phacun1g00020 968 Pfam IQ calmodulin-binding motif 904 920 IPR000048 GO:0005515
Phacun1g00020 968 Pfam Myosin head (motor domain) 186 828 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phacun1g00020 968 PRINTS Myosin heavy chain signature 214 233 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phacun1g00020 968 PRINTS Myosin heavy chain signature 543 571 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phacun1g00020 968 PRINTS Myosin heavy chain signature 268 293 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phacun1g00020 968 PRINTS Myosin heavy chain signature 312 339 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phacun1g00020 968 PRINTS Myosin heavy chain signature 596 624 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phacun1g00020 968 Gene3D Myosin VI head, motor domain, U50 subdomain 425 532 - -
Phacun1g00020 968 MobiDBLite consensus disorder prediction 14 88 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun1g00020 1 945 Myosins gene family AT5G54280 60.121 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun1g00020 K10357 - gmx:100802074 1538.09