Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun158g00002 ATGGAACACCATTTTGGTCAAGACGCTGCACCTGCATCTGGGTCCTTTGATAAGACTAGGGTTTTGAATGTGAAGCCATTAAGAACACTTGTTCCTGTGTTCCCTTCACCATCTAATCCTGCTTCGTCTTCAGCTCCACAAGGGGGTGCCCCATTTGTCTGTGTTTCACCTTCTGGTCCTTTCCCTTCTGGGGTTGCACCCTTCTATCCATTCTTCATCTCCCCTGAATCTCAGAGGCTCTCTGAGCAGAATGCACAAACGCCCACTGGTCAACGTGTGCCTGCTGCTCCTGCTGCTCCGATTTCTACTGCTCCTGCTGCTCCGATTTCTACTGCAGTTCCAATTAATTCATTTCGAACGCCAACTGGAGCTAGAAATGGTGATGTGGGCACATCGCGGAGGAATACCCGAAGTTGGGGACAGGTCACAGAGGAAGATGGCTACAGTAATGTTGTGATAGAGGAAGTTGATGCAGATGCAAGAACTAGGAGTGGAAGGTCAAAGCGCAAGTTGCAGAAGAAGATAAAGGGACCGCAGAGTGGTGTATCTGGGGATGTTGATCCGGATGCAGTGGCTGCTGATATTCTCAAGTCACTTAACCCATTGGTTTTCGAGGTACTAAATCAACCGGAAGGTAGCAGGGACTCAGTTGCATATACACTCATGATATATGAAGTAATGCGAAGAAAGCTTGGACAAATTGAGGATTCAAATAGGGCCGCTAACTCTGGAGCAAAACGACCTGATTTGAAGGCAGGTGCACTTATGATGAATAAAGGGATTCGGACCAACAGCAAGAAACATATTGGATCTGTGTCTGGTGTTGAGATTGGGGATATTTTCTTTTTCAGATTTGAATTGTGCTTAGTGGGTTTACATGCACCTTCTATGGCTGGAATTGATTATATCGGTACCAAAACCAGTCAAGAGGAAGAGCCCTTAGCTGTAAGTATTGTCTCATCTGGAGGGTATGAAGATGATGTGGAGGATGGGGATGTGCTGATTTACAGTGGCCAAGGTGGGGTTAACCGTGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGAAATCTTGCTTTGGATAATAGTGCCCATAGAGGTAACGAAGTGAGGGTAATTAGGGGTTTGAAGGATTTGCATCATCCGACTGGGAAGGTATATGTCTATGATGGCCTTTACAAGATTCAAGATTCCTGGGTGGACAAAGCAAAATCTGGTTTCAATGTATTCAAGCATAAATTAGGAAGGTTGCCTGGACAGCCTCCAGCATATATGATCTGGAAATCCATTCAACAATGGACTGAGAAATCTGCTTCAAGAGCTGGGGTTATATTGCCTGATCTTACTTCTGGGGCTGAAAAAGTACCTGTTTGTCTTGTGAATGATGTTGATGCTGAGAAGGGCCCTGCATATTTCACTTACCTCCCAAATCTTAAAAATTTGAGGCCATCTCCTCCATTGGAATCTTCTACTGGATGTTCTTGTGTTGGTGGATGCCAACCTAACAATTCTAACTGTCCTTGTGTTCAAAAGAATGGTGGCTATCTGCCATATTCTTCAGCTTCGTTAATTGCAGACCTAAAATCTGTTATATATGAGTGTGGTCCTTCTTGTCAATGTCCTTCTAATTGCCGAAACCGGGTTTCTCAAGGTGGCTTGAAGTTTCGTTTGGAGGTTTATAAAACCAAGAATAAAGGATGGGCTCTTAGATCATGGGATGCTATTCGAGCAGGATCTTTCATATGTGAGTATGCAGGGGAAGTCATAGATAGTGCCAGAGTGGAGGAAGAGCTTGGTGGTGAAAATCCTGACGATTACATTTTTGATTCTACTCGCATTTATCAGCAACTGGAAGTTTTTCCCGCTGACACTGAAGCTCCAAAAATCCCATCCCCCCTATATATATCAGCAATATATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCAAATGTATTATGGCGTCCAGTCATACATGATAATAAGAATATGTCAGATCTCCACATTGCTTTCTATGCAATTAGACATATCCCTCCTATGATGGAGTTAACCTATGATTATGGGACGGTTCTTCCTCTCAAAGCAGGTCATAGGAAAAAGAAATGCTTATGTGAATCTGTGAAATGCAGGGGTTACTTTTGTTAA 2154 0.4378 MEHHFGQDAAPASGSFDKTRVLNVKPLRTLVPVFPSPSNPASSSAPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTPTGQRVPAAPAAPISTAPAAPISTAVPINSFRTPTGARNGDVGTSRRNTRSWGQVTEEDGYSNVVIEEVDADARTRSGRSKRKLQKKIKGPQSGVSGDVDPDAVAADILKSLNPLVFEVLNQPEGSRDSVAYTLMIYEVMRRKLGQIEDSNRAANSGAKRPDLKAGALMMNKGIRTNSKKHIGSVSGVEIGDIFFFRFELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDDVEDGDVLIYSGQGGVNRDKGASDQKLERGNLALDNSAHRGNEVRVIRGLKDLHHPTGKVYVYDGLYKIQDSWVDKAKSGFNVFKHKLGRLPGQPPAYMIWKSIQQWTEKSASRAGVILPDLTSGAEKVPVCLVNDVDAEKGPAYFTYLPNLKNLRPSPPLESSTGCSCVGGCQPNNSNCPCVQKNGGYLPYSSASLIADLKSVIYECGPSCQCPSNCRNRVSQGGLKFRLEVYKTKNKGWALRSWDAIRAGSFICEYAGEVIDSARVEEELGGENPDDYIFDSTRIYQQLEVFPADTEAPKIPSPLYISAIYEGNVARFMNHSCSPNVLWRPVIHDNKNMSDLHIAFYAIRHIPPMMELTYDYGTVLPLKAGHRKKKCLCESVKCRGYFC* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun158g00002 717 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 131 716 IPR025794 GO:0016571
Phacun158g00002 717 ProSiteProfiles YDG domain profile. 270 416 IPR003105 -
Phacun158g00002 717 SMART preset_2 445 539 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phacun158g00002 717 SMART G9a_1 265 420 IPR003105 -
Phacun158g00002 717 MobiDBLite consensus disorder prediction 114 141 - -
Phacun158g00002 717 Pfam Pre-SET motif 449 547 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phacun158g00002 717 SUPERFAMILY SET domain 431 697 IPR046341 -
Phacun158g00002 717 ProSiteProfiles Pre-SET domain profile. 491 552 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phacun158g00002 717 SUPERFAMILY PUA domain-like 252 435 IPR015947 -
Phacun158g00002 717 ProSiteProfiles SET domain profile. 555 691 IPR001214 GO:0005515
Phacun158g00002 717 Pfam SAD/SRA domain 268 420 IPR003105 -
Phacun158g00002 717 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 253 435 - -
Phacun158g00002 717 Gene3D - 253 437 IPR036987 -
Phacun158g00002 717 Gene3D SET domain 438 716 IPR046341 -
Phacun158g00002 717 Pfam SET domain 566 691 IPR001214 GO:0005515
Phacun158g00002 717 SMART set_7 555 697 IPR001214 GO:0005515
Phacun158g00002 717 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 125 709 - -
Phacun158g00002 717 MobiDBLite consensus disorder prediction 161 186 - -
Phacun158g00002 717 ProSiteProfiles Post-SET domain profile. 701 717 IPR003616 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun158g00002 6 716 Su(var)3-9 homologs AT1G73100 45.554 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phacun158g00002 SAD_SRA 1.4e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun158g00002 K24405 - gmx:100786650 1228