Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun143g00001 ATGCCTAACTATTCAAATCACTCAACACCTCCCGTATTGAAGTCACATCACAAGCAATATGAGCGCTGGACAGAAAATGAACATAGGTTATTTCTTATTGGATTTCAAAACTGTACTCCGGGAAATTGGAAAAAAATTTCAGAATGTTATATTCCATCAAAAACTCCAACTCAAATTGCAAGTCACGCTCAAAAATACAGGCTTCATCATAATGGCCTAAAGAAAAATAAGAAGAGAAAAAGTATCCACGACATATCTTTAGAAGACACTAAGTGA 276 0.3478 MPNYSNHSTPPVLKSHHKQYERWTENEHRLFLIGFQNCTPGNWKKISECYIPSKTPTQIASHAQKYRLHHNGLKKNKKRKSIHDISLEDTK* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun143g00001 91 Gene3D - 22 70 - -
Phacun143g00001 91 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 9 90 IPR043363 -
Phacun143g00001 91 Pfam Myb-like DNA-binding domain 22 67 IPR001005 -
Phacun143g00001 91 CDD SANT 22 66 IPR001005 -
Phacun143g00001 91 MobiDBLite consensus disorder prediction 71 91 - -
Phacun143g00001 91 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 71 IPR017930 -
Phacun143g00001 91 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
Phacun143g00001 91 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 69 IPR006447 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phacun143g00001 Myb_DNA-binding 3.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun143g00001 - - pvu:PHAVU_004G065500g 180.644