Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun120g00056 ATGTACATCATCTTCCTCAAACTGCTACTCTTCCTCACATGGGCTTCTTCTCCATCTCTTTCCACCTCCATCACCCAGCTTGATACTCTCTTGGCCATCAGAGACTCTCTAGACCCAGAGAACCGCGTGTTGCTCTCATGGAACTCCCATTCGGACCCCTGTAGTAGTGCCTCTTTTGAGGGTGTGGCTTGCAATGAGCAAGGCCTCGTTACCAATATTTCACTGCAAGGAAAGGGTCTATATGGAACAGTACCTCCTGCTTTAGCTGCTCTCAAGAGCTTGACGGGTCTCTTCCTTCACTTCAATGCCCTCCATGGGATATTACCCAAGCAAATCACCACTTTGACTGACCTAACTGATTTGTATCTCAATGTCAATAACCTCTCTGGTGATATCCCTCGAGAGATTGGAAATATGTCAAATCTTCAAGTTTTGCAGCTTTGCTATAACAAGTTTAGTGGGAATATACCAAGTGAACTGGGAAGGCTGAGGAAGCTCAGTGTTGTTGCACTGCAATATAATGAATTAAATAGCGCCATTCCTGCGAGTTTGGGTGAAGTGGGGACATTGGAGCGATTGGATCTGAGCTTTAATAGCCTCTTGGGTCCAATTCCGGTGACATTGGCTGATGCGGCTAAACTCCAGAGTCTCAATGTTCGTAACAATTCTCTCTCTGGCCGTGTCCCTTCAGCTCTGAGAAGACTCAAAGGTGGGTTTGAGTACATGAACAATCCTGGTTTATGTGGGACTGGATTTGATGATTTAGATTCTTGCAAAGAAGTAAGCACTTCAGAACCGGTTAGACCCGAACCATATGAACCTGGTGACACTTCTACCAAAGATCTTCCTGCATCAATGGAACCACAACATGAAAGCTGTGGTCATTGTAAAAGGACGTCGAAATCTTCAAAAATTGGTCTGGTTTTTACCGTCATTGCAGTGGTTTTTGCTTCAACTGTTGCTGGACTGCTTTTGCTGTTTTGGCGACGCAGTCAGAATCAGAAAATTGGAAGTTCTGATAACGGGCTTAAACAAGTGTGTCAGAAAAGTGCGTTTCCTCTTATCAGTTTGGAGTATTCTGACGGTAGGGACCCATTCGAGAAAGGTGGAAGTGGGTATTCCTGGGAAGTTCTGGAAGGATTTATGTTTAACCTTGAAGAAGTAGAACGCGCAACTCAAATGTTCTCAGAGGTAAATTTATTGGGGAAGAGTGATTATTCAGCTCTGTACCGGGGGGTTTTGAGAGATGGTTCTGTTGTGACTATAAAGTGCATTGCCAAGACAAGTTGCAAATCTGATGAAGGTGAGTTCTTGAAAGGTTTGAAGATTTTGACGTCGTTAAGGCACGAAAATGTAGTTCGGTTGAGAGGGTTTTGCTGTTCAAAAGGGCGCGGGGAATGTTTTCTGATCTATGACTCTTTCTCTAATGGGAGTTTGTTACAGTATCTTGATGCTAAGAGAAACAGTGGTAGGGTACTTGATTGGTCGACCAGAGTGTTGATCATTCGTGGTATCGCCAAAGGTAAGTTTTTGTTCTGCTTCTTTCTTGAAAGAAATCGTAGCTAA 1566 0.4393 MYIIFLKLLLFLTWASSPSLSTSITQLDTLLAIRDSLDPENRVLLSWNSHSDPCSSASFEGVACNEQGLVTNISLQGKGLYGTVPPALAALKSLTGLFLHFNALHGILPKQITTLTDLTDLYLNVNNLSGDIPREIGNMSNLQVLQLCYNKFSGNIPSELGRLRKLSVVALQYNELNSAIPASLGEVGTLERLDLSFNSLLGPIPVTLADAAKLQSLNVRNNSLSGRVPSALRRLKGGFEYMNNPGLCGTGFDDLDSCKEVSTSEPVRPEPYEPGDTSTKDLPASMEPQHESCGHCKRTSKSSKIGLVFTVIAVVFASTVAGLLLLFWRRSQNQKIGSSDNGLKQVCQKSAFPLISLEYSDGRDPFEKGGSGYSWEVLEGFMFNLEEVERATQMFSEVNLLGKSDYSALYRGVLRDGSVVTIKCIAKTSCKSDEGEFLKGLKILTSLRHENVVRLRGFCCSKGRGECFLIYDSFSNGSLLQYLDAKRNSGRVLDWSTRVLIIRGIAKGKFLFCFFLERNRS* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun120g00056 521 Gene3D Ribonuclease Inhibitor 25 138 IPR032675 -
Phacun120g00056 521 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 140 508 IPR046959 -
Phacun120g00056 521 FunFam Protein NSP-INTERACTING KINASE 2 367 473 - -
Phacun120g00056 521 ProSiteProfiles Protein kinase domain profile. 395 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun120g00056 521 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Phacun120g00056 521 Pfam Leucine Rich Repeat 213 233 IPR001611 GO:0005515
Phacun120g00056 521 Gene3D Ribonuclease Inhibitor 141 250 IPR032675 -
Phacun120g00056 521 Pfam Protein tyrosine and serine/threonine kinase 399 508 IPR001245 GO:0004672|GO:0006468
Phacun120g00056 521 Gene3D Phosphorylase Kinase; domain 1 374 472 - -
Phacun120g00056 521 SUPERFAMILY L domain-like 23 236 - -
Phacun120g00056 521 MobiDBLite consensus disorder prediction 259 295 - -
Phacun120g00056 521 FunFam Protein NSP-INTERACTING KINASE 2 23 172 - -
Phacun120g00056 521 SUPERFAMILY Protein kinase-like (PK-like) 373 508 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun120g00056 8 508 Miscellaneous Gene Families AT4G22730 46.935 2.51e-156 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Phacun120g00056 PK_Tyr_Ser-Thr 2.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun120g00056 - - var:108327466 877.856