Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun120g00055 ATGTACATCATCTTCCTCAAACTGCTACTCTTCCTCACATGGGCTTCTTCTCCATCTCTTTCCACCTCCATCACCCAGCTTGATACTCTCTTGGCCATCAGAGACTCTCTAGACCCAGAGAACCGCGTGTTGCTCTCATGGAACTCCCATTCGGACCCCTGTAGTAGTGCCTCTTTTGAGGGTGTGGCTTGCAATGAGCAAGGCCTCGTTACCAATATTTCACTGCAAGGAAAGGGTCTATATGGAACAGTACCTCCTGCTTTAGCTGCTCTCAAGAGCTTGACGGGTCTCTTCCTTCACTTCAATGCCCTCCATGGGATATTACCCAAGCAAATCACCACTTTGACTGACCTAACTGATTTGTATCTCAATGTCAATAACCTCTCTGGTGATATCCCTCGAGAGATTGGAAATATGTCAAATCTTCAAGTTTTGCAGCTTTGCTATAACAAGTTTAGTGGGAATATACCAAGTGAACTGGGAAGGCTGAGGAAGCTCAGTGTTGTTGCACTGCAATATAATGAATTAAATAGCGCCATTCCTGCGAGTTTGGGTGAAGTGGGGACATTGGAGCGATTGGATCTGAGCTTTAATAGCCTCTTGGGTCCAATTCCGGTGACATTGGCTGATGCGGCTAAACTCCAGAGTCTCAATGTTCGTAACAATTCTCTCTCTGGCCGTGTCCCTTCAGCTCTGAGAAGACTCAAAGGTGGGTTTGAGTACATGAACAATCCTGGTTTATGTGGGACTGGATTTGATGATTTAGATTCTTGCAAAGAAGTAAGCACTTCAGAACCGGTTAGACCCGAACCATATGAACCTGGTGACACTTCTACCAAAGATCTTCCTGCATCAATGGAACCACAACATGAAAGCTGTGGTCATTGTAAAAGGACGTCGAAATCTTCAAAAATTGGTCTGGTTTTTACCGTCATTGCAGTGGTTTTTGCTTCAACTGTTGCTGGACTGCTTTTGCTGTTTTGGCGACGCAGTCAGAATCAGAAAATTGGAAGTTCTGATAACGGGCTTAAACAAGTGTGTCAGAAAAGTGCGTTTCCTCTTATCAGTTTGGAGTATTCTGACGGTAGGGACCCATTCGAGAAAGGTGGAAGTGGGTATTCCTGGGAAGTTCTGGAAGGATTTATGTTTAACCTTGAAGAAGTAGAACGCGCAACTCAAATGTTCTCAGAGGTAAATTTATTGGGGAAGAGTGATTATTCAGCTCTGTACCGGGGGGTTTTGAGAGATGGTTCTGTTGTGACTATAAAGTGCATTGCCAAGACAAGTTGCAAATCTGATGAAGGTGAGTTCTTGAAAGGTTTGAAGATTTTGACGTCGTTAAGGCACGAAAATGTAGTTCGGTTGAGAGGGTTTTGCTGTTCAAAAGGGCGCGGGGAATGTTTTCTGATCTATGACTCTTTCTCTAATGGGAGTTTGTTACAGTATCTTGATGCTAAGAGAAACAGTGGTAGGGTACTTGATTGGTCGACCAGAGTGTTGATCATTCGTGGTATCGCCAAAGGTATGGATTATCTGCATAGGAAGAAAGTAAGGCAAGATGGTGGAGTTCAGGAAAATATATCAGCTGAAAATATAGTTCTTGATTCTGGGTATAAGGCATTAATTGGAGATTCAGGATTGCACAATCTCCTTGAAGATGATGTTGTTTTTTCCGCCCTGAAAGCTAGCGCTGGCATGGGATATCTGCCTCCAGAGTACAGGAGAAGTGGTGGTTTGAGTGAAAAGAGTGATGTGTATGCCTTTGGAGTGATTGTTTTCCAGGTTCTGAGTGGAAAACGTGATATGAGGCAGTTAAATTTGGAAAGTGGTAGTTTGAAAGATATAGTTGATGAGAATCTTGAAGGGATGTTCTCAGAATCAGAGGCAGCCAAGCTGAGAAGAGTTGCTTTGCTTTGCACCCACCACTCCCCACTTCTTCGACCATCTATGGACACCCTAATGCTACAACTGGATGCTCAACAGTAG 1986 0.4391 MYIIFLKLLLFLTWASSPSLSTSITQLDTLLAIRDSLDPENRVLLSWNSHSDPCSSASFEGVACNEQGLVTNISLQGKGLYGTVPPALAALKSLTGLFLHFNALHGILPKQITTLTDLTDLYLNVNNLSGDIPREIGNMSNLQVLQLCYNKFSGNIPSELGRLRKLSVVALQYNELNSAIPASLGEVGTLERLDLSFNSLLGPIPVTLADAAKLQSLNVRNNSLSGRVPSALRRLKGGFEYMNNPGLCGTGFDDLDSCKEVSTSEPVRPEPYEPGDTSTKDLPASMEPQHESCGHCKRTSKSSKIGLVFTVIAVVFASTVAGLLLLFWRRSQNQKIGSSDNGLKQVCQKSAFPLISLEYSDGRDPFEKGGSGYSWEVLEGFMFNLEEVERATQMFSEVNLLGKSDYSALYRGVLRDGSVVTIKCIAKTSCKSDEGEFLKGLKILTSLRHENVVRLRGFCCSKGRGECFLIYDSFSNGSLLQYLDAKRNSGRVLDWSTRVLIIRGIAKGMDYLHRKKVRQDGGVQENISAENIVLDSGYKALIGDSGLHNLLEDDVVFSALKASAGMGYLPPEYRRSGGLSEKSDVYAFGVIVFQVLSGKRDMRQLNLESGSLKDIVDENLEGMFSESEAAKLRRVALLCTHHSPLLRPSMDTLMLQLDAQQ* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun120g00055 661 Gene3D Transferase(Phosphotransferase) domain 1 474 661 - -
Phacun120g00055 661 FunFam Protein NSP-INTERACTING KINASE 2 367 473 - -
Phacun120g00055 661 Pfam Protein tyrosine and serine/threonine kinase 399 656 IPR001245 GO:0004672|GO:0006468
Phacun120g00055 661 FunFam Protein NSP-INTERACTING KINASE 2 23 172 - -
Phacun120g00055 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 140 657 IPR046959 -
Phacun120g00055 661 SUPERFAMILY L domain-like 23 236 - -
Phacun120g00055 661 ProSiteProfiles Protein kinase domain profile. 395 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun120g00055 661 SUPERFAMILY Protein kinase-like (PK-like) 373 657 IPR011009 -
Phacun120g00055 661 Gene3D Phosphorylase Kinase; domain 1 374 472 - -
Phacun120g00055 661 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Phacun120g00055 661 Gene3D Ribonuclease Inhibitor 142 250 IPR032675 -
Phacun120g00055 661 Gene3D Ribonuclease Inhibitor 25 138 IPR032675 -
Phacun120g00055 661 MobiDBLite consensus disorder prediction 259 295 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun120g00055 8 508 Miscellaneous Gene Families AT4G22730 46.935 3.20e-155 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Phacun120g00055 PK_Tyr_Ser-Thr 1.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun120g00055 - - var:108327466 1110.9