Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun120g00052 ATGGATTCTGTTCAGTTGGGTGGTGTTCTAGTATCTGTATCTAAAATAGGCCTCTTGCAAAGTTTCGTCATAAAGGATTTCTTAATGGGGTCACCTGTTAATGGATTGGATTCTTTAGCAGAGGTTCAGAATTCAGTTTCTGTGGTAGATCATGATCCTCCTTCAACATCAGGGATTCCCCGGCCATCTCGGCCACCGTTAAGCACATCTAGAAATTATGGGGCTTCATCCAGTCAGCATAACTATGGAATGAAGACCATCCACCACCAAAAGCATTCATATCAGGAGGCTGACAACGTAGTGCGCGATGAAATGCCCAATATGGAGAAGCAGCACTATGACACAAATGGAAAATCTGAGTATGTGAGCCTCAATAAAGCTGTTGAAAGTTGTTTAGGAAAGAATATCTCCAAAATGGAAACAAAATTAAGTATGAAGCAACCGTTAGATGGTTCCAAGAATTGTGATTCTAGTGGCGACAATTGCAAATTAGTTTCGACAAAAGGGGTTGTTGATCGAACAAAGAGCAAGTGTGAGTCAGAGATTGGCTTTTGTCCAAGTCCTCAGAGTAGTTTCTATTCAGAAGCCAAGGAAAGTTTTGGCAACAATGGAGTGAGTGAATGTGTTAGTGTTGATAAGTCAGTGGAAAGTGGGGAAGTTACTAATTCCTGTGAATTTAACGAGAGCCGGAAGACCAGCATCTGTAGAGGCAGCACTGGAAGTGATGTTAGTGATGAGAGCAGCACTAGTAGTCTGAGCAGTGCTTTGTATAAGCCCCACAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCCATCCGAGTTCGTGACGGGGTGTTGGAAATGCGACATTTCAGGTTATTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCTGAACTAAGTGGCACCAGGACTTGTTTTGCAATGAAAGTAATGAACAAAACAGAGTTGGCAAGTCGCAAGAAGCTTGTTAGGTCTCAGACAGAGAGAGAGATACTGCAGTCTCTAGATCATCCATTTCTACCCACATTGTATACGCACTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTCAGGCAAAGACAACCTGGGAAGTATTTTTCTGAGATTGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCCTTAGAGTACTTGCACATGCTAGGGGTCATCTACAGAGATCTCAAGCCTGAGAATGTGTTGGTGAGAGAAGATGGACATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGTGCTGTCAGTCCAACTCTTGTGAAGTCATCAAACTCTACCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTTCCTGCATTGAGCCAACCTGTGTAATACAGCCAGACTGCATTCAGCCATCATGCTTCACACCGCGATTTCTCTCCGGCAAATCCAAGAAAGAAAAAAAGTTGAAGCCAAAGAATGATGTGCAGAACCAGGTGACCCCTCTTCCGGAGCTTATTGCCGAGCCCACGAATGCTCGATCAATGTCCTTTGTGGGGACACACGAGTACCTGGCACCTGAAATCATCAAAGGTGAAGGTCATGGCAGTGCTGTAGACTGGTGGACATTTGGGATATTCTTGTATGAACTCTTGTTCGGTAGAACGCCGTTCAAGGGTTCGGCAAACCGTGCAACACTATTCAATGTTGTTGGCCAGCCCTTGAAATTTCCAGAATCTCCCACTGTGAGCTTTGCTGCCAGGGACTTGATCAGAGGTTTACTTGTGAAAGAACCTCAGAATCGGCTTGCTTATAGACGTGGAGCAACAGAAATAAAACAACATCCATTTTTTCATAATGTTAACTGGGCACTGATCCGATGTGCAAATCCTCCAGAGATTCCAAGACAGGCCATGAAAGCACTTGCAGCTGAAAAGGTGCCTGGAGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 2001 0.4393 MDSVQLGGVLVSVSKIGLLQSFVIKDFLMGSPVNGLDSLAEVQNSVSVVDHDPPSTSGIPRPSRPPLSTSRNYGASSSQHNYGMKTIHHQKHSYQEADNVVRDEMPNMEKQHYDTNGKSEYVSLNKAVESCLGKNISKMETKLSMKQPLDGSKNCDSSGDNCKLVSTKGVVDRTKSKCESEIGFCPSPQSSFYSEAKESFGNNGVSECVSVDKSVESGEVTNSCEFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRVRDGVLEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEIAARFYVAEVLLALEYLHMLGVIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLETKSSGYCIQPSCIEPTCVIQPDCIQPSCFTPRFLSGKSKKEKKLKPKNDVQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLKFPESPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCANPPEIPRQAMKALAAEKVPGVKPSGNYLDIDFF* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun120g00052 666 FunFam serine/threonine-protein kinase D6PK-like 517 640 - -
Phacun120g00052 666 Pfam Protein kinase domain 519 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun120g00052 666 Pfam Protein kinase domain 286 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun120g00052 666 SMART serkin_6 285 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun120g00052 666 FunFam Serine/threonine-protein kinase D6PK-like 283 368 - -
Phacun120g00052 666 ProSiteProfiles Protein kinase domain profile. 285 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun120g00052 666 CDD STKc_phototropin_like 283 642 - -
Phacun120g00052 666 SUPERFAMILY Protein kinase-like (PK-like) 261 641 IPR011009 -
Phacun120g00052 666 MobiDBLite consensus disorder prediction 62 80 - -
Phacun120g00052 666 FunFam serine/threonine-protein kinase D6PK-like 369 436 - -
Phacun120g00052 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Phacun120g00052 666 Gene3D Transferase(Phosphotransferase) domain 1 516 640 - -
Phacun120g00052 666 Gene3D Transferase(Phosphotransferase) domain 1 369 437 - -
Phacun120g00052 666 MobiDBLite consensus disorder prediction 48 80 - -
Phacun120g00052 666 PANTHER FLIPPASE KINASE 1-RELATED 114 644 - -
Phacun120g00052 666 Gene3D Phosphorylase Kinase; domain 1 283 368 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun120g00052 210 666 AGC Kinase Gene Family AT5G47750 72.996 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phacun120g00052 Pkinase 6.6e-37 CL0016