Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun112g00114 ATGGCTTCAACTTCAGCATCTTATTCCTTTACCATTAGTGTGTTGTTCTTCATTTTTGTGCACTTGTCATGTTTCGCAAACAAACTTAATGCAAAGCATAGTCACAACCATCGCAAGCCTCAACACACTCAGAATTCTCCCTTGAACCCAAGACTTAACATGGCCTTTCTTGGCCTCCAAGCATGGAAGCAAGTGATCTACTCGGACCCAAATAACTTCACTGCCAATTGGGTAGGTCCTTCAGTGTGCAACTACACAGGTGTGTACTGTGCTCCCTCAGTTGATGATCCTAAAGTGAGAGTTGTAGCTGGCATTGACCTTAACTTTGGAGACATAGCAGGGTTTCTACCCAATGAAATAGGCCTTCTGTCAGACCTTGCACTCCTTCACCTTAGTAACAACCGCTTCTGTGGCATCCTGCCAATGTCCTTAACCAACCTCACTCAACTCTATGAGCTTGATATTAGCAACAACAGGTTTGTTGGTCCGTTTCCTTTGGTCGTGCTTTCCATTCATATGCTCACCTACCTTGACCTCCGCTACAATGAATTTGAAGGGCCATTGCCTCCTCAACTATTCAACAAAACCTTTGATGCCATTTTCCTCAACAACAACCGCTTCAGCAGTAATATTCCTCCAAACTTGGGCAAAAACTTAGCTTCTGTCATGGTCTTTGCCAACAATAAATTTGGAGGGTGTCTCCCAGAAAGCATAGTGAACTTTGCTGACACTTTGGAGGAGCTTGTGCTAATCAACACTAGCTTGTCAGGTTGTTTGCCACAGCAAGTGGGGTTTCTCTACAAACTGAGAGTGTTGGATGTGAGTTTCAACAGCATTGTTGGCCCCATTCCTTATAGCCTTGCAGGGTTGTCTCACTTGGAGCAACTAAACTTGGGACACAACTTGATGAGTGGCACTGTCCCTATGGGGGTTTGTGAATTGCCAAACTTGGCAAACTTCACTTTCTCTTACAACTTCTTCTGTGAGGAAGAGGGTATCTGTCAAAACTTGACATCAAAGAGAATAGTGTTTGATGACAGAAGGAACTGTTTGCCAGAGAAGCCACTGCAGAGGAGCCAAAAGGAATGCAGTGCTAAACTTGAACACCCAGTTGATTGCTCTGAGCTTTGCTGTGTTGTTGGGAGCAATGTCTCTGCTGGTTCAGTGGCTGTCCCACCTGCTGCTGCTATTCCCGTAGCAATGCCTGTATCTGCTCCTCTTCTTGCACCAAGCCACCCTTAA 1242 0.4525 MASTSASYSFTISVLFFIFVHLSCFANKLNAKHSHNHRKPQHTQNSPLNPRLNMAFLGLQAWKQVIYSDPNNFTANWVGPSVCNYTGVYCAPSVDDPKVRVVAGIDLNFGDIAGFLPNEIGLLSDLALLHLSNNRFCGILPMSLTNLTQLYELDISNNRFVGPFPLVVLSIHMLTYLDLRYNEFEGPLPPQLFNKTFDAIFLNNNRFSSNIPPNLGKNLASVMVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLRVLDVSFNSIVGPIPYSLAGLSHLEQLNLGHNLMSGTVPMGVCELPNLANFTFSYNFFCEEEGICQNLTSKRIVFDDRRNCLPEKPLQRSQKECSAKLEHPVDCSELCCVVGSNVSAGSVAVPPAAAIPVAMPVSAPLLAPSHP* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun112g00114 413 FunFam Leucine-rich repeat extensin-like protein 1 56 217 - -
Phacun112g00114 413 SUPERFAMILY L domain-like 63 342 - -
Phacun112g00114 413 Gene3D Ribonuclease Inhibitor 226 377 IPR032675 -
Phacun112g00114 413 Pfam Leucine rich repeat 244 302 IPR001611 GO:0005515
Phacun112g00114 413 Gene3D Ribonuclease Inhibitor 57 225 IPR032675 -
Phacun112g00114 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 382 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun112g00114 49 378 Leucine-rich Repeat extension Gene Families AT3G24480 54.683 1.64e-131 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun112g00114 - - gmx:100782629 732.25