Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun112g00095 ATGGATCAGCTTGGAATTCAACCCTCTTCAACCAAGGTTGAAAGAAGGCTCGTTGAAAAAAACAGAAGAAACCAGATGAAGATCCTCTTCAACAAACTCAATTCTCTTCTCCCTAGCTACAACCCCAAGGAAGTATTGTCACTGCCAGACCAAGTGGATGAGGCAATCAACTACATCAAGAGTTTGGAGGCGAAGGTGAAGATGGCACAGGAGAAGAAAGAGAGTTTGCAGGGTATTAAGAAAAGACCCCGCGGTTGCTTCTCCAGTAGCAGAGCTACTTTTGCTGCAACACGTCTTCCAAAATCTCCACAACTTGAGATTCGAGAAGTGGGTTCCTCCCTACAAGTTGTTCTGATTACTGGGATAGACCACCAGTTCATTTTCTGTGAAATTATTCGAATGCTGCATGAAGAGAAGATAGAGGTTAGAAGTGCCAATTCCTCACTCACTGGAGACTCGGTGCTTCATGTTGTGCATGCTGAGATTCCTCAATCTTTTCTTCAATTAGGAGCCACCAAAGTAAGTGAGAGGTTGAAAAGGTTTGTAAATGGATCCAACAGTGACGTCGAAACACAAGACGAATGGTGGGATTTTGATATTTGTAGTGATGATATGTGGGGTTTCTAG 627 0.4338 MDQLGIQPSSTKVERRLVEKNRRNQMKILFNKLNSLLPSYNPKEVLSLPDQVDEAINYIKSLEAKVKMAQEKKESLQGIKKRPRGCFSSSRATFAATRLPKSPQLEIREVGSSLQVVLITGIDHQFIFCEIIRMLHEEKIEVRSANSSLTGDSVLHVVHAEIPQSFLQLGATKVSERLKRFVNGSNSDVETQDEWWDFDICSDDMWGF* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun112g00095 208 Gene3D - 6 86 IPR036638 GO:0046983
Phacun112g00095 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 78 IPR036638 GO:0046983
Phacun112g00095 208 FunFam Transcription factor bHLH162 4 88 - -
Phacun112g00095 208 Coils Coil 52 79 - -
Phacun112g00095 208 SMART finulus 16 68 IPR011598 GO:0046983
Phacun112g00095 208 Pfam Helix-loop-helix DNA-binding domain 13 63 IPR011598 GO:0046983
Phacun112g00095 208 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 62 IPR011598 GO:0046983
Phacun112g00095 208 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 182 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun112g00095 10 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.556 1.01e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phacun112g00095 HLH 3.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun112g00095 - - vun:114170573 353.214