Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun112g00082 ATGGCGTATAACAGTGGAATGTCCAGCAAGGAGGGTGCTGAAGAGACCCAGCAGCACAAAGTGTTCGGTGAAAGTGAAGGCCAAGATTCGGAGAAAGAGAAGAGAAAGGGTGTGGATTTGAGCTCAGGGAGGAGACAATGGAAGCCAGTTTTTGATGATGCTTCTATCTCAGAAAGGCCTCTCAAGAAAATCCGCAGCCCCGAACGCCAAAATCCCAATCAACAACCTTCTTCATCATCCTCCTCTATGCTCTCTCTCCAACCTCCTTCATCAAGAATAGTGTTTCCTTTTGCTTTTGAAGGCTCTCAACACCCAATGCCATCATTCCCACACTCACTTGGAACCACAAACTTGCCTCTTTTTCGTCCCCCTCTTCAGCCAACGCAACAAATGATATCGTTTGGATCCCAACAGAACATGGGGTATCCACCATTCCTATGCCCAGATTCCACCATATCAAACCAACCACAGCTCCAACAGCAGCAGCAGTATCAGCAGCAGCAGCTTCTTCAGTATTGGAATGACGCACTCAATTTGAGTCCAAGAGGGAGGATGATGATGATGATGAACCGGTCAGGGCATGAAGGGAGACCAATGTTAAGGCCTCAAGGACAGCCTTTGAATGCCACCAAGCTCTATAGGGGAGTAAGGCAACGCCATTGGGGCAAATGGGTTGCTGAAATTCGTCTCCCTCGCAATAGAACTCGTCTCTGGCTTGGAACCTTCGACACTGCTGAAGATGCTGCTATGGCTTATGATCGTGAAGCCTTTAAGCTTAGAGGAGAAAATGCTAAGCTCAATTTCCCTGAACTCTTCCTTAACAAAGGTAAAGTAGAACCATCCACACCTGCTCCTGCTTCTTCTTCCAACGAAGGTTCAACATCAACATCAAGCCAGAACACAAAGCAACCTGAGCCAGTTCCAGAAGAGACCAACACTGAGAGTGAGGACGTGCCACCAACTGAGACATTAGCAGAAGAGAATGCTGAAACCGAGGAAGGAGTTTCACAGCCTCAGGAATTGGTTTGGGGAGAGTGGTTCAATACAATTCCTGCAGGTTGGGGTCCTGGAAGTCCCGTGTGGGATGATTTAGACCCCAACAACAATCTTCTTTTGCATTCACAACTTCCCTTTGTGAATCCAGCTCATCAAGAGTTCCATCATGAAGCCGGTGCTGCTTCTCAGACACAACAAGATAACAACAACACAGAACCAGGTTCTTCCTCTCCCTCTTGTCCCATGAGGCCCTTCTTCTGA 1257 0.4781 MAYNSGMSSKEGAEETQQHKVFGESEGQDSEKEKRKGVDLSSGRRQWKPVFDDASISERPLKKIRSPERQNPNQQPSSSSSSMLSLQPPSSRIVFPFAFEGSQHPMPSFPHSLGTTNLPLFRPPLQPTQQMISFGSQQNMGYPPFLCPDSTISNQPQLQQQQQYQQQQLLQYWNDALNLSPRGRMMMMMNRSGHEGRPMLRPQGQPLNATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENAKLNFPELFLNKGKVEPSTPAPASSSNEGSTSTSSQNTKQPEPVPEETNTESEDVPPTETLAEENAETEEGVSQPQELVWGEWFNTIPAGWGPGSPVWDDLDPNNNLLLHSQLPFVNPAHQEFHHEAGAASQTQQDNNNTEPGSSSPSCPMRPFF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun112g00082 418 MobiDBLite consensus disorder prediction 51 66 - -
Phacun112g00082 418 MobiDBLite consensus disorder prediction 67 87 - -
Phacun112g00082 418 SMART rav1_2 212 275 IPR001471 GO:0003700|GO:0006355
Phacun112g00082 418 SUPERFAMILY DNA-binding domain 212 270 IPR016177 GO:0003677
Phacun112g00082 418 CDD AP2 211 271 IPR001471 GO:0003700|GO:0006355
Phacun112g00082 418 ProSiteProfiles AP2/ERF domain profile. 212 269 IPR001471 GO:0003700|GO:0006355
Phacun112g00082 418 Gene3D AP2/ERF domain 212 270 IPR036955 GO:0003700|GO:0006355
Phacun112g00082 418 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 24 364 - -
Phacun112g00082 418 MobiDBLite consensus disorder prediction 390 410 - -
Phacun112g00082 418 PRINTS Ethylene responsive element binding protein signature 235 251 IPR001471 GO:0003700|GO:0006355
Phacun112g00082 418 PRINTS Ethylene responsive element binding protein signature 213 224 IPR001471 GO:0003700|GO:0006355
Phacun112g00082 418 FunFam Ethylene-responsive transcription factor 2 211 270 - -
Phacun112g00082 418 Pfam AP2 domain 213 261 IPR001471 GO:0003700|GO:0006355
Phacun112g00082 418 MobiDBLite consensus disorder prediction 276 339 - -
Phacun112g00082 418 MobiDBLite consensus disorder prediction 281 308 - -
Phacun112g00082 418 MobiDBLite consensus disorder prediction 382 418 - -
Phacun112g00082 418 MobiDBLite consensus disorder prediction 310 329 - -
Phacun112g00082 418 MobiDBLite consensus disorder prediction 1 87 - -
Phacun112g00082 418 MobiDBLite consensus disorder prediction 13 42 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun112g00082 34 365 AP2-EREBP Transcription Factor Family AT4G28140 42.136 9.42e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phacun112g00082 AP2 2.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun112g00082 - - gmx:100811328 634.024