LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phacun112g00073	ATGGGTGCTCTTCAGTCTACACTTCTCTACTTGATTTTACTACACTCATGCAGGATTGTTGCTTACAATAACCAAGAGTGGAAGAAAGCCACTGCAACGTATGCCAAAGACTCAGAGGGGTCTCTTGTCACCGAAGGAGCTTGTGGTTATGGAGATCTCCACAAGGCAAGTTATGGGAAACACAGTGCTGGCTTAAGCACCATGTTGTTCAACAGAGGGAGCACATGTGGTGCCTGCTATGAGATTAGATGTGTTGACCACATCTTGTGGTGTGTGATGGGAAGCCCTTCTGTAGTTGTTACTGTTACAGATTTCTGTGCTCCAAATTATGGGCTTTCAGTTGATTATGGTGGCTGGTGCAATTTTCCAAGAGAACATTTTGAGATGTCAAAGACTGCATTTGCTGAAATTGCCAAGAATAAAGCTGATATAGTGCCGGTTCAGTATAGAAGAGTAAAGTGTGAAAGAAGTGGTGGCGTGAGATTCACAATGAGTGGGGGTTCTCACTTCTATCAAGTGCTGATTTCCAATGTTTGTGTGGATGGTGAAGTGATTGCTGTGAAAGTGAAGGGGTCTAGAACAGGATGGATACCAATGGCAAGGAACTGGGGACAATACTGGCACTGCAATGTCAACTTTCAGAATCAGCCTTTGTCCTTTGAGAATCTTCTCTTCAGACCTGAAGCCATGGCGGTTCGGTTCTTCCAGAACCCGATGCCCGAATTCGTACCCGAAGCGACGCCGTCTACTCCGCAGGAACAAGAAGAAGCCCTCACAGTAGGGGACTCACTCCCGAAGCTCCTGGCCATGCCCCACGCGCCACTCTCGGAGCGTCTCAAACGCGCCGCTCTAGACCTCAAAGAAACCATAGTGATAGAAACGTGGGGGGTGTCATGGCGAAAAGAAGGTGACTTTTCTCTCTACTGCGGCGTTCTGGGCACGGCTTTTCTGCTCTTGAAGTCTTACGAAGTGACACGCAACGGGAACGATCTTTCTCTTTGCTCTCAGATTGTGAAGGCTTGCGATGCCGCTTCCGTTCGTTCCAGGGATGTGACCTTTATTTGTGGTCGTGCTGGCGTGTGCTCTCTCGGGGCCGTGGCTGCAAAACACGCCGGGGATGATGAGTCCTTGAGGTACTACATGGCTCAGTTCGAAAAGATTAAGCTGTCCAAAGATCTTCCTGACGAGTTGTTATATGGGAGAGTTGGTTTTCTGTGGGCCTGTTTGTTCCTAAACAAGCACCTTGGTCAGGGGACGGTTCCTTCCAGTTATACTGCTATGGTTGTTGATGAAGTCATTAAAAGTGGAAGGAGGTTGGGTAGGAAGGGGAGATGCCCATTGATGTTTGAATGGTACGGGGAGAAGTATTGGGGTGCTGCGCATGGATTGGCAGGGATTATGCATGTGCTGATGGATATGGAGTTGAAGCCAGATGAGCTTGAGGATGTTAAGGGAACTCTCAAATACATGATAAGCAATCGCTTTTCCAGTGGAAACTATCCCGCTAGTGAAGATGATAGGAAGAGCGACGTTCTTGTGCATTGGTGTCATGGAGCTCCAGGGATAGCCCTTACACTTGTCAAAGCAGCTAAGGTTTTTGGAGATAAAGAATTCTTGGATGCAGCTATGGAAGCAGGAGAGGTGGTTTGGAATCGTGGTCTGCTTAGGAAAGTTGGGATATGCCATGGTATAAGTGGGAATGCATATGTGTTTCTGTCACTGTATCAACTTACAGGGAATGTGAAGCATCTGTACAGAGCCAAGGCTTTTGCTTGCTTTTTGCTTGACAGAGCTCATAAGCTGATATCTGGAGGTGAAATGCATGGAGGTGATAGACCATATTCATTGTTTGAAGGGCTAGGAGGCATGGCTTATCTTTTCTTGGATATGATCGATCCTTCCCTGTCTAAATTTCCAGCGTATGAACTCTGA	1932	0.4726	MGALQSTLLYLILLHSCRIVAYNNQEWKKATATYAKDSEGSLVTEGACGYGDLHKASYGKHSAGLSTMLFNRGSTCGACYEIRCVDHILWCVMGSPSVVVTVTDFCAPNYGLSVDYGGWCNFPREHFEMSKTAFAEIAKNKADIVPVQYRRVKCERSGGVRFTMSGGSHFYQVLISNVCVDGEVIAVKVKGSRTGWIPMARNWGQYWHCNVNFQNQPLSFENLLFRPEAMAVRFFQNPMPEFVPEATPSTPQEQEEALTVGDSLPKLLAMPHAPLSERLKRAALDLKETIVIETWGVSWRKEGDFSLYCGVLGTAFLLLKSYEVTRNGNDLSLCSQIVKACDAASVRSRDVTFICGRAGVCSLGAVAAKHAGDDESLRYYMAQFEKIKLSKDLPDELLYGRVGFLWACLFLNKHLGQGTVPSSYTAMVVDEVIKSGRRLGRKGRCPLMFEWYGEKYWGAAHGLAGIMHVLMDMELKPDELEDVKGTLKYMISNRFSSGNYPASEDDRKSDVLVHWCHGAPGIALTLVKAAKVFGDKEFLDAAMEAGEVVWNRGLLRKVGICHGISGNAYVFLSLYQLTGNVKHLYRAKAFACFLLDRAHKLISGGEMHGGDRPYSLFEGLGGMAYLFLDMIDPSLSKFPAYEL*	644

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phacun112g00073	643	PRINTS	LanC-like protein superfamily signature	512	532	IPR007822	GO:0031179
	Phacun112g00073	643	PRINTS	LanC-like protein superfamily signature	558	571	IPR007822	GO:0031179
	Phacun112g00073	643	PRINTS	LanC-like protein superfamily signature	395	410	IPR007822	GO:0031179
	Phacun112g00073	643	PRINTS	LanC-like protein superfamily signature	304	322	IPR007822	GO:0031179
	Phacun112g00073	643	PRINTS	LanC-like protein superfamily signature	456	472	IPR007822	GO:0031179
	Phacun112g00073	643	PRINTS	LanC-like protein superfamily signature	613	630	IPR007822	GO:0031179
	Phacun112g00073	643	Pfam	Expansin C-terminal domain	160	221	IPR007117	-
	Phacun112g00073	643	SUPERFAMILY	LanC-like	300	643	-	-
	Phacun112g00073	643	CDD	euk_LANCL	307	639	-	-
	Phacun112g00073	643	ProSiteProfiles	Expansin, Cellulose-binding-like domain profile.	169	265	IPR007117	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phacun112g00073	9	224	Expansin Gene Family	AT4G38210	62.100	1.09e-94	290

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phacun112g00073	-		-	gmx:100803464	775.778

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