Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun112g00062 ATGGCTCAATTGCCACCAAAAATTCCAAACATGACACCCAATTGGTCAGACTTTTCTTCTCCTCACCAAAAGATGCCTTCCCTCAAAACCATGGCACCAAACATGTCAAACCAAAACCCTTCATGGGTGGATGAGTTTCTAGACTTCTCAACAGCTAGACGCGGTGCTCACCGGCGCTCGGTGAGTGACTCCATCGCCTTCCTTGAGGCACCAATGCTGGATCATCACTGTAAAAGTCGTGGGAGTGAAGGTGGTGACAATGAGAACGAGTTCGAGAGGTTTGATGATGAACAATTCATGTCCATGTTTAGTGATGAGGCCTCAGGGAATAATAACAACAATAATACTAATAATAACACCATGATGGCACTTTCCTCCTCCAACCCTTCTACACCCTCTGATCACAACAGCATCAACGATGAGAAGGAGATATACACGGAAAAGGAGGAGGAGCAAGAGCAGAAGCAAGTGAAGAATGAGTCAGATGAGGATGAAAGCCAATGCAAGCAAGAAATCACACAAACCCCCGATGATAGTAATAATAGTAACGCAAATGCAACAACTTTTTCCAGTGAGAAAATCACAGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCGGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATATCTGAGCTTGAACGAAGTGTGACTTCATTACAGGCCGAAGTTTCTGTATTGTCTCAACGAGTTTCATTTTTGGATCATCAACGTTTGCTTCTAAATGTTGACAACAGTGGTTTGAAGCAAAGAATCGCTGCGCTGGCCCAAGACAAGATCTTCAAAGATGCACATCAAGAAGCACTGAAGAGGGAGATAGAGAAACTGAGGCAAGTGTATCACCAACAAAACAAAAAGAAGATGGACAATGCTGCAGGGTCACCATCCCAATCCCCATTTCCATCTCCAAAACCACGATGTGATACAGACACTGAGAATGAACAGCTTATCAATGTTTGA 993 0.4371 MAQLPPKIPNMTPNWSDFSSPHQKMPSLKTMAPNMSNQNPSWVDEFLDFSTARRGAHRRSVSDSIAFLEAPMLDHHCKSRGSEGGDNENEFERFDDEQFMSMFSDEASGNNNNNNTNNNTMMALSSSNPSTPSDHNSINDEKEIYTEKEEEQEQKQVKNESDEDESQCKQEITQTPDDSNNSNANATTFSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSQRVSFLDHQRLLLNVDNSGLKQRIAALAQDKIFKDAHQEALKREIEKLRQVYHQQNKKKMDNAAGSPSQSPFPSPKPRCDTDTENEQLINV* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun112g00062 330 MobiDBLite consensus disorder prediction 136 171 - -
Phacun112g00062 330 CDD bZIP_plant_RF2 199 249 IPR044759 GO:0003700|GO:0006355
Phacun112g00062 330 SUPERFAMILY Leucine zipper domain 198 252 IPR046347 GO:0003700|GO:0006355
Phacun112g00062 330 Coils Coil 135 167 - -
Phacun112g00062 330 MobiDBLite consensus disorder prediction 1 26 - -
Phacun112g00062 330 PANTHER BASIC LEUCINE ZIPPER 34 1 317 - -
Phacun112g00062 330 MobiDBLite consensus disorder prediction 172 193 - -
Phacun112g00062 330 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 201 216 IPR004827 GO:0003700|GO:0006355
Phacun112g00062 330 SMART brlzneu 194 258 IPR004827 GO:0003700|GO:0006355
Phacun112g00062 330 MobiDBLite consensus disorder prediction 290 330 - -
Phacun112g00062 330 Coils Coil 277 297 - -
Phacun112g00062 330 Gene3D - 197 249 - -
Phacun112g00062 330 MobiDBLite consensus disorder prediction 9 26 - -
Phacun112g00062 330 MobiDBLite consensus disorder prediction 104 194 - -
Phacun112g00062 330 Pfam Basic region leucine zipper 195 243 IPR004827 GO:0003700|GO:0006355
Phacun112g00062 330 MobiDBLite consensus disorder prediction 104 135 - -
Phacun112g00062 330 FunFam Transcription factor VIP1 197 268 - -
Phacun112g00062 330 Coils Coil 221 241 - -
Phacun112g00062 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 196 248 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun112g00062 1 275 bZIP Transcription Factor Family AT3G58120 58.725 2.24e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phacun112g00062 bZIP_2 1.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun112g00062 - - gmx:778128 476.478