Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun112g00057 ATGCAGAGAAATAATAGTGGAATGCATCCAGCCTGTGCAGCATGCAAGCATCAAAGGAAGAAATGCAGTGAGAATTGTATATTGGCACCTTACTTTCCATCAAACAGAAGCCGTGAGTTCCATGCTGTGCACAAGGTTTTTGGTGTTAGCAACATAACCAAGTTGGTTAAGAATGCTAGAGAGGACGATAGAAGAAGAGTTGTGGATTCATTGACATGGGAAGCATGCTGCAGGCAAAGGGACCCCATACATGGCCCGTATGGAGAGTACACAAAAGTTTACAATGAGTACAAGAAAGTGTTGGATGAACTTAAGAGATTCAGAAGCCAACACCAAATGTTGCAGTTTCCCTCTCTAGGGTTAAAGTCTGTGCAAGATTTGATTGCTTGCAAAGGGGAAGACAAAGCAGAAGTTGATAATACATTGGATTATCTTCATGGAAAAAAGAATGGTATTATTGATTCTGAGACTTATAATACTTATTGTTCCAATTATTTTCAAGAGTTTCAGAATCTGAGGCCTCCTGAAGTTGTCATACCCTTTCAGCAGCACTCTCAATCATACTACATTACAGGTATTCATCTTTGA 588 0.398 MQRNNSGMHPACAACKHQRKKCSENCILAPYFPSNRSREFHAVHKVFGVSNITKLVKNAREDDRRRVVDSLTWEACCRQRDPIHGPYGEYTKVYNEYKKVLDELKRFRSQHQMLQFPSLGLKSVQDLIACKGEDKAEVDNTLDYLHGKKNGIIDSETYNTYCSNYFQEFQNLRPPEVVIPFQQHSQSYYITGIHL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun112g00057 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 114 - -
Phacun112g00057 195 Pfam Lateral organ boundaries (LOB) domain 11 106 IPR004883 -
Phacun112g00057 195 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun112g00057 9 109 AS2 family AT1G06280 56.436 2.85e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phacun112g00057 LOB 7.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun112g00057 - - gmx:100809173 336.65