LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phacun112g00046	ATGATGAGAGAAAGTTCCAAGGGCAAGTGTGGATCCTCTTCTATTCAATCCATGAAGGAGAAGGAGAAACACCTGGTGGATAAAATTCAAGGGATTTTCAGCAATCTTCAGTGTGCAAGAAAAGAGGGCAGGGGCAATGATATTGTGATCTTTGAGGAGCAGATGCATCAGCTGCTCCGCGAGTGGAAGGCGGAACTGGAGTCTCCAGCCACCTCCTTAGCTGATGGGAGCTTTGATTCGTTTACCAGTGAACTGGCCCAACTGTTGCAAGTGATTGAGGAGAAAGACGATGCAACTAGTCCATTAACAAAGCCTGGGCCATTGAAGACTGAGCTCCAAACAAGTAACATTAGTGACAACAATTTTCAGTTTTTTCAGGAGAAGCATTTCGATGGTAATCAACATCTTGGTCATAATTTTGAAGGCTCTGCTTCAACTCTGTACAACAATGCTTTTAGTAACACAGATATGGATCTCGGGCACAACACAGAAATTAAACACTCAGAATCAACTCAATTTAGTTTAGAAGGTTTTGATTGTAGCCAAATCTTCGGAGCTGGGGATACTGTGCAGCATGGAGAGAATATTATACCTAACATTCTTCCAAATATTTGCCCTCCACCTTCTGCTTTCTTAGCTCCCAAATGTGCCCTGTGGGACTGTTTCAGACCCGCTCAAGGGGTAGAATGGTGCCAGAACTACTGTAGCAGTTGTCATGAGCTGTTGGCAAATAATGAGGGTCTTCCTGGCATGACTCCAATTTTACGACCTGGGGGCATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCTAAGACGCAGGGAAAGGAAGTGGGCATCCCTAGTTGTGAAGGCGCCGCGTCAACGAAATCCCCCTGGAATGCTCCAGAGTTCTTTGATCTTTCTTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTATTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAACAGAAAACAAAGATCACTTCCAGATTATAGCGGACGGGGTTGGCATGAATCAAGAAAGCAGGTGATGAAAGAACATGGGGGACAAAAGAGGTCCTATTACATGGACCCCCAGCCTCTTAGTTATCTGGAGTGGCATTTGTATGAGTATGAGATCAACAACCACGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTGGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTAATGATTTACAGAACAAGATGGGACAGCTTACTGCTGCTGTTCTATCTGATGATGGAGTACCACCCATCAATGGAAAGACAAATGCCAAGTCTGAGAATGATGGATCTCCAGAAAAGTAA	1350	0.4385	MMRESSKGKCGSSSIQSMKEKEKHLVDKIQGIFSNLQCARKEGRGNDIVIFEEQMHQLLREWKAELESPATSLADGSFDSFTSELAQLLQVIEEKDDATSPLTKPGPLKTELQTSNISDNNFQFFQEKHFDGNQHLGHNFEGSASTLYNNAFSNTDMDLGHNTEIKHSESTQFSLEGFDCSQIFGAGDTVQHGENIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCQNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDKKKSPKGKVTKESLNDLQNKMGQLTAAVLSDDGVPPINGKTNAKSENDGSPEK*	450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phacun112g00046	449	MobiDBLite	consensus disorder prediction	327	357	-	-
	Phacun112g00046	449	MobiDBLite	consensus disorder prediction	425	449	-	-
	Phacun112g00046	449	PANTHER	TRANSCRIPTION FACTOR VOZ1	2	442	IPR039277	GO:0006355\|GO:0048578
	Phacun112g00046	449	MobiDBLite	consensus disorder prediction	336	357	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phacun112g00046	1	422	VOZ-9 Transcription Factor Family	AT1G28520	55.125	1.62e-159	458

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Phacun112g00046		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phacun112g00046	-		-	vra:106755121	857.825