LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phacun112g00039	ATGAGTATTCACAACGAAGATCAGTCTTCTAAACTATTTCAATCTCAAACCCACATATTGAACCAAACTTTTGGTTTCATAAACTCTATGTGCCTTAAATGTGCAATTGATTTGTGCATACCTGATGTCATACACAAGTATGGCAAACCTATGCCACTCTCACAACTCATTGCTTCACTCCCAATTCATCCTTCCAAGACTTGCTTTATTTCCCGCTTGATGCAAATCTTGGTCCATTCTGGTTTTTTCTCTCAACACAATGTCACTCATAATAATCAAGAAGTAAGTTATGTGTTAACTGATGCATCTACACTACTCCTTAAGGACCATCCCTTTCGTATGACATGTTTGCTACAAGTCATACTTGATCCAGTTTTGTTCAATCCATGGTTTCAATTCTCCACTTGGTTCACAAATGATGACCCTACACCATTTCACACACAAAATGAGATGACTTTGTGGGACTATGCTAGCCGTGAGCCCAAATTCAATCACCTTTTCAATGATGCCATGACTAATGACACTCGATTGATTTCCAGTGTGGTGATTGAGAAGTGCAAGGGAGTGTTGGAAGGATTAGAATCTTTGGTTGATGTTGGGGGAGGAACAGGAACTTTGGTTAAGGCCATTGCCAACTCATTTCCACACTTGAACTGCATTGTCTTTGATCTCCCACATGTTGTTCATGGCTTGCAAGGAACGGATAACATAAAATATGTTGGAGGGGACATGTTTGAAACAATCCCTTCTGCTGATTCCATCATGTTGAAGACTGTAATGCATAACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGAGATGTAAGGAGGCAATCAAAAACAAAGATAAAGGAAAAGTGATTATCATAGACACGGTGATAGGAAACGTGAAAGGAGACAGTGAATCAGAACAAACAAAGCTCTACTATGATATGGAGATGATGGTGTTGGTTACTGGAAAACAGAGAAATGAGAAAGATTGGGCTAAGTTGTTCTTTTCTGCAGGATTCAATCACTACAAGATAACTCAAGTTCTAGGTTTCAAGTCTCTCATAGAGGTTTATCCATAG	1071	0.3912	MSIHNEDQSSKLFQSQTHILNQTFGFINSMCLKCAIDLCIPDVIHKYGKPMPLSQLIASLPIHPSKTCFISRLMQILVHSGFFSQHNVTHNNQEVSYVLTDASTLLLKDHPFRMTCLLQVILDPVLFNPWFQFSTWFTNDDPTPFHTQNEMTLWDYASREPKFNHLFNDAMTNDTRLISSVVIEKCKGVLEGLESLVDVGGGTGTLVKAIANSFPHLNCIVFDLPHVVHGLQGTDNIKYVGGDMFETIPSADSIMLKTVMHNWNDEECLKILKRCKEAIKNKDKGKVIIIDTVIGNVKGDSESEQTKLYYDMEMMVLVTGKQRNEKDWAKLFFSAGFNHYKITQVLGFKSLIEVYP*	357

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phacun112g00039	356	Pfam	Dimerisation domain	30	78	IPR012967	GO:0046983
	Phacun112g00039	356	Gene3D	-	1	106	IPR036388	-
	Phacun112g00039	356	Gene3D	Vaccinia Virus protein VP39	108	356	IPR029063	-
	Phacun112g00039	356	Pfam	O-methyltransferase domain	133	338	IPR001077	GO:0008171
	Phacun112g00039	356	PANTHER	O-METHYLTRANSFERASE	13	341	IPR016461	GO:0008168
	Phacun112g00039	356	PIRSF	O-mtase	1	356	IPR016461	GO:0008168
	Phacun112g00039	356	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	20	356	IPR016461	GO:0008168
	Phacun112g00039	356	SUPERFAMILY	"Winged helix" DNA-binding domain	8	111	IPR036390	-
	Phacun112g00039	356	FunFam	O-methyltransferase ZRP4	108	356	-	-
	Phacun112g00039	356	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	112	355	IPR029063	-
	Phacun112g00039	356	CDD	AdoMet_MTases	196	295	-	-
	Phacun112g00039	356	FunFam	Coniferyl alcohol 9-O-methyltransferase	2	106	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phacun112g00039	30	342	Monolignol Biosynthesis Gene Families	AT5G54160	31.875	6.04e-51	172

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phacun112g00039	-		K16040	gmx:100793263	598.201