Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun112g00023 ATGTTCAGCAGAATGTTCCTGTTTTTTCTTTACTTCCTCTTCCTTCTCTCTCCTCCGGGACACACTCTCTCTCTAACCCAAGACGGTCTTTTCCTCCTCCAGGCGCGCAGTTGCCTCTCCGACCCCAACAACTCACTCTCCTCCTGGAACGCCGCCGCCTCCACCCCCTGCCGGTGGAAGGGCGTCACCTGCGACCATCATTCAGCAGCAGTCACTGCCCTCGATTTCTCCTTCTCCTTCCTCTCCGGCCCCTTCCCCGCCGCCCTCTGCCGCCTCCCCTCCCTCTCCTCCCTCAACCTCTCCTACAACCTTATCAACTCCACCCTCTCCACGGTCTCCCTCTGCCGCTTCCTCCTCTATCTCGACCTCTCCCAAAACGCCCTCGTGGGCCCCATCGACTCCCTCGCCGCACTCACCTCCCTCCGCTACCTCGACCTCTCAGGCAACAACCTCACCGGCGAAATTCCGGAGAGCCTCGCCGCCCTACCCCACCTCGAAACGCTCAACCTCGTTAGCAATCTTTTCACCGGCACCATCCCTGCTTCACTCGGTAACCTCACTTCGCTGAAACGCCTTCAACTCGCTTACAACCCCTTCAAGCCGGGTCCCATACCGAGAGAACTGGGTAACCTTGGAAACCTTGAAACGCTTTATCTCGCTCTGTGCAACCTGGAAGGTCCCATTCCAGACACCTTTAGCAATCTCGTTAACTTGATAAGCCTCGACTTGTCTCAGAACAGCATCACCGGTCACATTCCGCAATGGTTCACGCGTTTCACGCGCGTGTCCCAAATTGAGCTTTACAATAATTCGCTCTCCGGGAAGCTACCCAGAGGAATGTCGAAGATGACGAGTTTGAAATTATTCGACGCGTCCAGGAACGAGTTGACTGGGACCATTCCGACCGAGTTGTGCGAGTTGCCACTCGAGTCTCTGAATTTAAATGAGAACAAACTCGAAGGGTTTTTGCCGGGGGCCATTGCGCGTTCTCCGAACCTCAGTGAACTCAAACTTTTCAGTAACAGGCTCGTCGGAACGTTGCCGAGTGATTTGGGGAGTAACTCACCGTTGAACCAGATTGACGTTTCGTTTAACCGGTTTTCTGGCGAAATTCCCGCGAATATTTGCCGGCAGGGGCAGCTTGAGCAGCTAATCTTGATATACAATTCGTTTTCCGGTGAAATTCCCGAGAGTCTCGGGAAATGCAAGAGTTTAATGAGGGTTCGGTTAAGGAACAATAATCTCTCGGGAAGTGTTCCTGAAGGGGTTTGGAGTTTGCCCCGTTTGCATTTGCTTGAGCTTTTGGAAAATTATTTTTCTGGGCACATTTCTAAGGGGATTTCTGGCTCTTCCAGCTTGTCAAATTTGTTGCTTTCTAATAACCGGTTTTCTGGGTCGATTCCTGAGGAAATTGGGTTATTGGACAATCTTGTGGAGTTTGCTGCTAGTAATAATAATCTCTCGGGTCAGATTCCGGGGAGTATGGTGAAGATGAAGCAGTTGGTTAATCTCGATCTCAGTTGTAATGAACTTTCTAGTGATCTTAAATTTGGTGGAATTGGTTACTTGAATAAGGTCACTGACCTTAATTTGTCACATAATAGGTTGGATGGAAATGTTCCAAGTGAATTAGGAAGTTTCCTTGTGCTTAATTCTCTTGATCTTTCTTGGAACAATTTCTCTGGGGAGATTCCATTGCAGTTGCAAAATTTGAGGCTATCTGTGCTGAATTTGTCTTACAACAAGCTCTCAGGGGATATTCCTCCACTTTATGCCAATGCCAAGTATAAGACGAGTTTTATAGGGAATCCTGGCCTCTGTAGTCATCTCCCTGGGCTTAGTTATTGTTATGGTAGGAATAAGAACTGGAGGTATATGTGGATTTTGTGGTCCATTTTTGTGCTTGCTGGAGTTGTGTTCATTATTGGGGTGGCATGGTTTTACTTTAGGTACAGGAAGGTGAAGAAATTGAAGAAAGGGTTATGCACTTCGAGTTGGAAGTCATTTCACAAGCTGCGGTTTAGTGGGTTTGAGGTTGCTAAGTTGCTGAATGAGGCCAATGTGATAGGAAGGGGAGCATCTGGGAAGGTGTACAAGGTGGTGCTTAACAATGGTGAGGTGGTGGCAGTGAAAAAATTGAGTGGAGTAGCGAAAGTGGATGAAAATTTTGGTTCTAGAAAAGATGAATTTGATGCTGAAGTAGAAACACTGGGGAGGATTAGGCACAAGAATATTGTGAGATTGTGGTGTTGCTGCAACAGTGGGGACCACAAGCTATTGGTTTTCGAATACATGCCAAATGGGAGCTTGGCTGATCTGTTACAGGGTAGCAAGAAGAGCTTGTTGGATTGGCCTACTAGGTATAAAATTGTTGTTGATGCTGCTGAGGGGCTTTGTTATTTGCATCATGATTGTGTCCCACCCATTGTCCACAGGGATGTGAAATCTAACAATATATTGGTTGATGAGGAGTTTGTGGCAAAAGTTGCAGATTTTGGAGTTGCCAAAATGGTTGCAAGAGCCGGCAAAGGGACAGAATCAATGTCTATTATTGCAGGATCATATGGCTACATTGCACCAGAATACGCATACACTATGAGGGTGAATGAGAAGAGTGACATATACAGCTTTGGGGTGGTGATTTTGGAGTTGGTAACTGGGAGACCCCCCATTGATCCAGAGTATGGTGAAAATGATTTGGTGAAATGGGTTTCCTCTGCATTGGAACATGAAGGACTGGATCATGTAATTGATCCTACATTGGACTCCAAACACAGGGAAGAAATAAGCAAGGTATTGAGTGTGGGTCTGCATTGCACCACCTCCATCCCAATAACTCGCCCTACAATGAGAAAAGTGGTTAAAATGCTTCGTGAGGTAACAACAGTGCCCAAATGCACAAGTGTAAATGATGGAAATGACCCTTCTTACCATGAAGGCTCGTCTCATTGTATCAGTGAAGATTAG 2967 0.4719 MFSRMFLFFLYFLFLLSPPGHTLSLTQDGLFLLQARSCLSDPNNSLSSWNAAASTPCRWKGVTCDHHSAAVTALDFSFSFLSGPFPAALCRLPSLSSLNLSYNLINSTLSTVSLCRFLLYLDLSQNALVGPIDSLAALTSLRYLDLSGNNLTGEIPESLAALPHLETLNLVSNLFTGTIPASLGNLTSLKRLQLAYNPFKPGPIPRELGNLGNLETLYLALCNLEGPIPDTFSNLVNLISLDLSQNSITGHIPQWFTRFTRVSQIELYNNSLSGKLPRGMSKMTSLKLFDASRNELTGTIPTELCELPLESLNLNENKLEGFLPGAIARSPNLSELKLFSNRLVGTLPSDLGSNSPLNQIDVSFNRFSGEIPANICRQGQLEQLILIYNSFSGEIPESLGKCKSLMRVRLRNNNLSGSVPEGVWSLPRLHLLELLENYFSGHISKGISGSSSLSNLLLSNNRFSGSIPEEIGLLDNLVEFAASNNNLSGQIPGSMVKMKQLVNLDLSCNELSSDLKFGGIGYLNKVTDLNLSHNRLDGNVPSELGSFLVLNSLDLSWNNFSGEIPLQLQNLRLSVLNLSYNKLSGDIPPLYANAKYKTSFIGNPGLCSHLPGLSYCYGRNKNWRYMWILWSIFVLAGVVFIIGVAWFYFRYRKVKKLKKGLCTSSWKSFHKLRFSGFEVAKLLNEANVIGRGASGKVYKVVLNNGEVVAVKKLSGVAKVDENFGSRKDEFDAEVETLGRIRHKNIVRLWCCCNSGDHKLLVFEYMPNGSLADLLQGSKKSLLDWPTRYKIVVDAAEGLCYLHHDCVPPIVHRDVKSNNILVDEEFVAKVADFGVAKMVARAGKGTESMSIIAGSYGYIAPEYAYTMRVNEKSDIYSFGVVILELVTGRPPIDPEYGENDLVKWVSSALEHEGLDHVIDPTLDSKHREEISKVLSVGLHCTTSIPITRPTMRKVVKMLREVTTVPKCTSVNDGNDPSYHEGSSHCISED* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun112g00023 988 Gene3D Ribonuclease Inhibitor 310 624 IPR032675 -
Phacun112g00023 988 ProSiteProfiles Protein kinase domain profile. 683 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun112g00023 988 ProSiteProfiles Leucine-rich repeat profile. 572 594 IPR001611 GO:0005515
Phacun112g00023 988 Gene3D Transferase(Phosphotransferase) domain 1 765 974 - -
Phacun112g00023 988 FunFam Receptor-like protein kinase HSL1 308 615 - -
Phacun112g00023 988 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 380 958 - -
Phacun112g00023 988 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 25 186 - -
Phacun112g00023 988 SMART serkin_6 683 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun112g00023 988 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 973 - -
Phacun112g00023 988 SUPERFAMILY RNI-like 265 591 - -
Phacun112g00023 988 SUPERFAMILY L domain-like 35 367 - -
Phacun112g00023 988 Gene3D Ribonuclease Inhibitor 179 236 IPR032675 -
Phacun112g00023 988 Gene3D Ribonuclease Inhibitor 237 309 IPR032675 -
Phacun112g00023 988 Pfam Protein kinase domain 685 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phacun112g00023 988 Gene3D Phosphorylase Kinase; domain 1 653 764 - -
Phacun112g00023 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Phacun112g00023 988 ProSiteProfiles Leucine-rich repeat profile. 140 163 IPR001611 GO:0005515
Phacun112g00023 988 SUPERFAMILY Protein kinase-like (PK-like) 683 957 IPR011009 -
Phacun112g00023 988 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Phacun112g00023 988 Pfam Leucine rich repeat 140 198 IPR001611 GO:0005515
Phacun112g00023 988 Pfam Leucine rich repeat 213 272 IPR001611 GO:0005515
Phacun112g00023 988 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Phacun112g00023 988 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 210 303 - -
Phacun112g00023 988 Gene3D Ribonuclease Inhibitor 26 178 IPR032675 -
Phacun112g00023 988 SMART LRR_typ_2 235 258 IPR003591 -
Phacun112g00023 988 SMART LRR_typ_2 138 161 IPR003591 -
Phacun112g00023 988 SMART LRR_typ_2 92 115 IPR003591 -
Phacun112g00023 988 SMART LRR_typ_2 304 329 IPR003591 -
Phacun112g00023 988 SMART LRR_typ_2 162 186 IPR003591 -
Phacun112g00023 988 SMART LRR_typ_2 523 547 IPR003591 -
Phacun112g00023 988 SMART LRR_typ_2 211 234 IPR003591 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun112g00023 22 982 Receptor kinase-like Gene Family AT1G28440 56.224 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phacun112g00023 Pkinase 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun112g00023 - - gmx:100796415 1432.93