Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phacun112g00019 ATGCTTGCCGTGGCACCTTTGAGGAGCATCAAAGATGAAAAGAACCAAGGAGAGATGGAGGGTTTCTCGATGGCAACAGCAACAACACCAGATGATGTTGACTTTGTTGACCTTTCTGAAGGGAACTTGTTGGAGAGCATCAACTTCGACGACCTCTTCGTCGGCATCGACGTTGACGGAGATGTCTTGCCGGACTTGGAGATGTTTGGTGAGTTTTCCGTCAGCGCCGGTGAAGAGTCATCGGAGATGAACTCATCAGCAGAGAACAGCAAGGAGGAAAATGATAAAAGTTGTGTTATCACTGCTTCAAAGACGGAAGAGGAAGATAAAAGTTCTTGTGCTGCTTCACGTCAAGACTCGGGGTCAAACCCAGGAGAGGAGATAGTGAGCAATAAGAATGGTGAATCCGTGGTGGTGAATCCGGCTCCAAAGGAAGGTGGAAAAGGAAAAAAATCTTCATCGGCTCAACTGAAGAATAATAGTAATAGTAATAATCCTCAAGGGAAGAGAAAACTGAAGGTGGATTGGACCCCAGAATTGCACAGGAGATTTGTGCAAGCTGTGGAACAGCTAGGAGTGGACAAGGCAGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGATAGTCTCACTCGTCATAACATTGCTAGCCACCTTCAAAAATACAGATCTCATAGGAAACACTTGCTGGCTCGTGAGGCTGAAGCAGCAAGTTGGAGTCAAAGAAGGCACATATATGGTGTTGGTGGAAGTGGAGGGAAGAGAGAGGGGAGTCCATGGCTAGCACCCACCATGGGATTCCCTCCTCCAATGACCACAATGCACCATTTTAGACCTCTGCACGTATGGGGACACCCCTCCACGGACCACTCCTTCATGCACATGTGGCCTAAACATCTTCCACCTTCACAACCACTCTCATGCCCATCACCTGCACCACCCCAAGACCCTTTTCTTTGGCACCAACGGGCTCCAACTGCACTAATACCAGGAGCAGCTTGTTTCCCACAACCTCTGACACCAACGGGTTTTGGAACTCACCTTGTCCCTGGCATCCCACCTCATGCCATGTACAAAGCAGATCAAAGCATTGCCATCCAGGGTCCCCGTCCCCTACTAGATTTTCATCCGTCAAAAGAGTGCATAGATGCAGCTATTGGAGATGTTTTATCAAAGCCATGGCTGCCCTTACCTCTTGGACTGAAGGCTCCAGCAATTGATAGTGTGATGAGTGAATTACAGAGACAAGGGATTCCAAACATTCCACCCGCTAGTGCTTGA 1281 0.4824 MLAVAPLRSIKDEKNQGEMEGFSMATATTPDDVDFVDLSEGNLLESINFDDLFVGIDVDGDVLPDLEMFGEFSVSAGEESSEMNSSAENSKEENDKSCVITASKTEEEDKSSCAASRQDSGSNPGEEIVSNKNGESVVVNPAPKEGGKGKKSSSAQLKNNSNSNNPQGKRKLKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRHIYGVGGSGGKREGSPWLAPTMGFPPPMTTMHHFRPLHVWGHPSTDHSFMHMWPKHLPPSQPLSCPSPAPPQDPFLWHQRAPTALIPGAACFPQPLTPTGFGTHLVPGIPPHAMYKADQSIAIQGPRPLLDFHPSKECIDAAIGDVLSKPWLPLPLGLKAPAIDSVMSELQRQGIPNIPPASA* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phacun112g00019 426 MobiDBLite consensus disorder prediction 115 137 - -
Phacun112g00019 426 Pfam Myb-like DNA-binding domain 174 223 IPR001005 -
Phacun112g00019 426 NCBIfam myb-like DNA-binding domain, SHAQKYF class 171 225 IPR006447 GO:0003677
Phacun112g00019 426 SUPERFAMILY Homeodomain-like 170 228 IPR009057 -
Phacun112g00019 426 FunFam Two-component response regulator 167 230 - -
Phacun112g00019 426 MobiDBLite consensus disorder prediction 85 114 - -
Phacun112g00019 426 MobiDBLite consensus disorder prediction 152 170 - -
Phacun112g00019 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 168 227 IPR017930 -
Phacun112g00019 426 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 425 IPR044825 GO:0003700|GO:0045893
Phacun112g00019 426 MobiDBLite consensus disorder prediction 74 173 - -
Phacun112g00019 426 Gene3D - 168 229 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phacun112g00019 1 377 G2-like Transcription Factor Family AT5G44190 39.303 1.68e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phacun112g00019 Myb_DNA-binding 4.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phacun112g00019 - - gmx:100777595 625.55