Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04257 ATGGGTGAGGCAACTGACACTCTGGGTGAATCCCCCGCCGTTGAGTTAATCGGAAAGATAATGATAATCGTTATAGTGTTCTTCTTCTTCCTTGTTGTAATTGCTCTCGGCATTCATCTCTTCACTAGAAACTTCTGGTGGCGCAACCCTGCTCCCCAATCACGGCGCCGCCGCCGCCGCTTTGTGTTTTCCTCCGGTCAAGAGGGTGGTCTTCGAAGCGGACTGGATCCCTCCGTGCTGAGCTCCATACCCGTGTTGGTGTTCCAAGGCCAAGACTTCAAGGACGGTTTGGAATGTGCGGTTTGCCTCTCGGAGGTCGTGGAAGGAGAAAAGGCCAGGCTTTTGCCCAAATGCAATCATGGGTTTCACGTTGGTTGCATTGACATGTGGTTCCAGTCCCATTCTACCTGCCCTCTTTGCAGAAACTCTGTTGCTGTTCAATCCGATGAAAGCTCGGAATCAGAGTCTCCAACTTTTCCCACTAACGTTTTGGTTTGGGGGGATCACACTCAGATAACTTCTACCGGTGGTGCTTCTTTGGAGGAAGGTGCTTCTCAGCCACCTTGCCCCTCCTCATCCTCTTCTTCTGCTACTTGTGATGATGATAGTAACAACAACAGCAGCAATAGACGTCACGGAACCTTGGTGATTGACATACCAAGTGATATCACTTCGACTTCTTTGTCGCCTTCTGCAAGCAGATTTGGTGAAGATGACTTGAAATCGCCAATGACAGGAAAACTGAGGTCCTTGAAGAGGCTTTTGAGCAGGGACAGAAGGTTAAACCCTTGGAGTCCTACTTCTGTAGATGTAGAACAAGCAGCTAATTCAGGAGGAGGAGGAGGAGGAGGACTCAGTTGA 861 0.4959 MGEATDTLGESPAVELIGKIMIIVIVFFFFLVVIALGIHLFTRNFWWRNPAPQSRRRRRRFVFSSGQEGGLRSGLDPSVLSSIPVLVFQGQDFKDGLECAVCLSEVVEGEKARLLPKCNHGFHVGCIDMWFQSHSTCPLCRNSVAVQSDESSESESPTFPTNVLVWGDHTQITSTGGASLEEGASQPPCPSSSSSSATCDDDSNNNSSNRRHGTLVIDIPSDITSTSLSPSASRFGEDDLKSPMTGKLRSLKRLLSRDRRLNPWSPTSVDVEQAANSGGGGGGGLS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04257 286 CDD RING-H2_EL5-like 98 141 - -
Phac9g04257 286 Pfam Ring finger domain 98 141 IPR001841 -
Phac9g04257 286 MobiDBLite consensus disorder prediction 240 259 - -
Phac9g04257 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 151 IPR013083 -
Phac9g04257 286 SUPERFAMILY RING/U-box 79 147 - -
Phac9g04257 286 SMART ring_2 99 140 IPR001841 -
Phac9g04257 286 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 149 IPR044675 -
Phac9g04257 286 FunFam RING-H2 finger protein ATL3 67 146 - -
Phac9g04257 286 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Phac9g04257 286 MobiDBLite consensus disorder prediction 175 286 - -
Phac9g04257 286 MobiDBLite consensus disorder prediction 175 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04257 Phac-Chr9 40038432 40040580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04257 15 262 C3H Transcription Factor Family AT1G53820 42.000 1.28e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04257 - - gmx:100797420 314.694