Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04252 ATGAACTCACCATCCCAGCTTGGTTGGCCTGCTAATGGTGATGATCCATGTGGACAATCTTGGAAAGGCATTACTTGCTCAGGCAACCGTGTTACAGAGATTAAGTTATCTAATCTTGGACTAACTGGGTCGTTGCCTTACGGATTACAAGTCTTGACATCTTTGACCAGCCTAGACATGAGTAGCAACAGTCTTGGCGGCAGCATACCATACCAACTCCCTCCATATGTGCAGCGATTAAATCTTGCTTATAATAACATCACAGGGACAGTTCCTTACTCTATTTCAAACTTGACCGCTCTTACAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGGCTGTTAACTTTCTTAATCTTTCTACCCTCTCCACATTGGATCTGTCTTTCAATTCTCTAACAGGTGACCTCCCTCAGACTATGAGCTCACTTTCACACATAACAACCATGAATCTGCAAAACAATCAGTTTACAGGCGCTATTGATGTCCTTGCTAATCTTCCTCTGGATAATCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCGGAACAGTTGAAGAACATAAACCTACAGAGTGGTGGTAATGGATGGAGCTCTGGATCTGCACCCCCACCTCCTCCTGGGACGCCTCCCGTACCTAAAAGCCACAAACACAAGTCTGGAGGGGGAAGCACCACCTCGTCAAATGTTGGCAGTAGCAGCAGCTCAGTTGATGGGGGCAAAAAGTCTGGTATAGGAGGTGGTGCCATAGCTGGAATTGTAATCTCTGTCATAGTCGTTGGGGCAATAGTAGCATTCTTTCTGGCGAGGAGAAAATCCAAGAAGACATCTTCAGATTTAGAAAAGCTGGACGATCAGTCCTTTGCTCCACTTCCTTCAAATGGAGTGCATGAAGAGAAGTCTGAGCAAACATCCTCTATATCTGACTTGAAGACATTTGATACTTCTGCCTCAATAAATCTTAAACCCCCGCCTATTGATCGACATAAATCATTTGATGATGAAGAGTTCTCCAAGAAGCCCACAATTGTGAAGAAGACTGTAACAGCTCCTGCAAATGTGAAATCATACTCTATAGCTGACCTGCAGATTGCTACTGGTAGCTTCAGTGTGGATCACCTTGTTGGCGAGGGGTCTTTTGGGCGTGTGTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCAGTGAAGAAGATAGATTCATCTGTCCTTTCCAATGATTTGTCAGATGATTTTATAGAAATAATTTCAAACATCTCCATTTTGCATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCAGAGTATGGACAACACCTCTTGGTCTACGAATTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGACGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTCTGGGTACTGCACGTGCTTTAGAGTACCTACATGAAGTTAGTTCGCCATCAGTTGTTCATATGAATATTAAGTCAGCCAACATATTACTTGATGCAGAGCTTAATCCTCATCTTTCAGATAGTGGATTGGCAAGCTATATTCCAAACGCAGACCAGATACTGAGTCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCGTTGTCTGGTCAGTATACTTTGCAAAGTGATGTCTACAGCTTTGGGGTTGTCATGTTGGAACTTCTCAGCGGACGGAAGCCATTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGGTAAAATGGTTGATCCTACATTGAAGGGGCTATATCCTGTTAAGTCTCTTTCTCGATTTGCCGATGTTATCGCCCTTTGCGTGCAGCCGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTGCGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGCAGCAGTGATCTTGGAGGATCCCAACGAGGAAGTGATGAGGCAGCTCTACGGGAGATCTAA 2040 0.4397 MNSPSQLGWPANGDDPCGQSWKGITCSGNRVTEIKLSNLGLTGSLPYGLQVLTSLTSLDMSSNSLGGSIPYQLPPYVQRLNLAYNNITGTVPYSISNLTALTDLNLGHNQLQQGLAVNFLNLSTLSTLDLSFNSLTGDLPQTMSSLSHITTMNLQNNQFTGAIDVLANLPLDNLNVENNNFTGWIPEQLKNINLQSGGNGWSSGSAPPPPPGTPPVPKSHKHKSGGGSTTSSNVGSSSSSVDGGKKSGIGGGAIAGIVISVIVVGAIVAFFLARRKSKKTSSDLEKLDDQSFAPLPSNGVHEEKSEQTSSISDLKTFDTSASINLKPPPIDRHKSFDDEEFSKKPTIVKKTVTAPANVKSYSIADLQIATGSFSVDHLVGEGSFGRVYRAQFDDGEVLAVKKIDSSVLSNDLSDDFIEIISNISILHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHMNIKSANILLDAELNPHLSDSGLASYIPNADQILSHNVGSGYDAPEVALSGQYTLQSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALGKMVDPTLKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDLGGSQRGSDEAALREI* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04252 679 MobiDBLite consensus disorder prediction 658 679 - -
Phac9g04252 679 MobiDBLite consensus disorder prediction 282 312 - -
Phac9g04252 679 Gene3D Ribonuclease Inhibitor 138 202 IPR032675 -
Phac9g04252 679 PANTHER LEUCINE RICH REPEAT KINASE 2 29 653 - -
Phac9g04252 679 MobiDBLite consensus disorder prediction 223 244 - -
Phac9g04252 679 ProSiteProfiles Protein kinase domain profile. 373 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04252 679 ProSitePatterns Protein kinases ATP-binding region signature. 379 402 IPR017441 GO:0005524
Phac9g04252 679 PRINTS Leucine-rich repeat signature 55 68 - -
Phac9g04252 679 PRINTS Leucine-rich repeat signature 122 135 - -
Phac9g04252 679 MobiDBLite consensus disorder prediction 196 244 - -
Phac9g04252 679 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 337 450 - -
Phac9g04252 679 SUPERFAMILY L domain-like 12 191 - -
Phac9g04252 679 Pfam Protein tyrosine and serine/threonine kinase 376 645 IPR001245 GO:0004672|GO:0006468
Phac9g04252 679 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 451 659 - -
Phac9g04252 679 Gene3D Phosphorylase Kinase; domain 1 335 450 - -
Phac9g04252 679 Gene3D Transferase(Phosphotransferase) domain 1 452 665 - -
Phac9g04252 679 SUPERFAMILY Protein kinase-like (PK-like) 355 645 IPR011009 -
Phac9g04252 679 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 1 212 - -
Phac9g04252 679 Gene3D Ribonuclease Inhibitor 2 137 IPR032675 -
Phac9g04252 679 Pfam Leucine Rich repeat 53 67 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04252 Phac-Chr9 40020217 40027914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04252 1 658 Strubbelig Receptor Gene Family AT1G53730 68.271 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phac9g04252 PK_Tyr_Ser-Thr 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04252 - - gmx:100807707 1104.74