Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04248 ATGGTGGAGTTTCGAAGGTTGTTGCTGAGCATCACTACCTGCATTCTTTGTTGGATGCCCAATGGTGCTGCTGTCTCCACAGATCCAAATGATGCTTCTGCTGTGAGATTTTTGTTTCAAAATATGAACTCACCATCCCAGCTTGGTTGGCCTGCTAATGGTGATGATCCATGTGGACAATCTTGGAAAGGCATTACTTGCTCAGGCAACCGTGTTACAGAGATTAAGTTATCTAATCTTGGACTAACTGGGTCGTTGCCTTACGGATTACAAGTCTTGACATCTTTGACCAGCCTAGACATGAGTAGCAACAGTCTTGGCGGCAGCATACCATACCAACTCCCTCCATATGTGCAGCGATTAAATCTTGCTTATAATAACATCACAGGGACAGTTCCTTACTCTATTTCAAACTTGACCGCTCTTACAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGGCTGTTAACTTTCTTAATCTTTCTACCCTCTCCACATTGGATCTGTCTTTCAATTCTCTAACAGGTGACCTCCCTCAGACTATGAGCTCACTTTCACACATAACAACCATGAATCTGCAAAACAATCAGTTTACAGGCGCTATTGATGTCCTTGCTAATCTTCCTCTGGATAATCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCGGAACAGTTGAAGAACATAAACCTACAGAGTGGTGGTAATGGATGGAGCTCTGGATCTGCACCCCCACCTCCTCCTGGGACGCCTCCCGTACCTAAAAGCCACAAACACAAGTCTGGAGGGGGAAGCACCACCTCGTCAAATGTTGGCAGTAGCAGCAGCTCAGTTGATGGGGGCAAAAAGTCTGGTATAGGAGGTGGTGCCATAGCTGGAATTGTAATCTCTGTCATAGTCGTTGGGGCAATAGTAGCATTCTTTCTGGCGAGGAGAAAATCCAAGAAGACATCTTCAGATTTAGAAAAGCTGGACGATCAGTCCTTTGCTCCACTTCCTTCAAATGGAGTGCATGAAGAGAAGTCTGAGCAAACATCCTCTATATCTGACTTGAAGACATTTGATACTTCTGCCTCAATAAATCTTAAACCCCCGCCTATTGATCGACATAAATCATTTGATGATGAAGAGTTCTCCAAGAAGCCCACAATTGTGAAGAAGACTGTAACAGCTCCTGCAAATGTGAAATCATACTCTATAGCTGACCTGCAGATTGCTACTGGTAGCTTCAGTGTGGATCACCTTGTTGGCGAGGGGTCTTTTGGGCGTGTGTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCAGTGAAGAAGATAGATTCATCTGTCCTTTCCAATGATTTGTCAGATGATTTTATAGAAATAATTTCAAACATCTCCATTTTGCATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCAGAGTATGGACAACACCTCTTGGTCTACGAATTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGACGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTCTGGGTACTGCACGTGCTTTAGAGTACCTACATGAAGTTAGTTCGCCATCAGTTGTTCATATGAATATTAAGTCAGCCAACATATTACTTGATGCAGAGCTTAATCCTCATCTTTCAGATAGTGGATTGGCAAGCTATATTCCAAACGCAGACCAGATACTGAGTCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCGTTGTCTGGTCAGTATACTTTGCAAAGTGATGTCTACAGCTTTGGGGTTGTCATGTTGGAACTTCTCAGCGGACGGAAGCCATTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGGTAAAATGGTTGATCCTACATTGAAGGGGCTATATCCTGTTAAGTCTCTTTCTCGATTTGCCGATGTTATCGCCCTTTGCGTGCAGCCGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTGCGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGCAGCAGTGATCTTGGAGGATCCCAACGAGGAAGTGATGAGGCAGCTCTACGGGAGATCTAA 2163 0.4397 MVEFRRLLLSITTCILCWMPNGAAVSTDPNDASAVRFLFQNMNSPSQLGWPANGDDPCGQSWKGITCSGNRVTEIKLSNLGLTGSLPYGLQVLTSLTSLDMSSNSLGGSIPYQLPPYVQRLNLAYNNITGTVPYSISNLTALTDLNLGHNQLQQGLAVNFLNLSTLSTLDLSFNSLTGDLPQTMSSLSHITTMNLQNNQFTGAIDVLANLPLDNLNVENNNFTGWIPEQLKNINLQSGGNGWSSGSAPPPPPGTPPVPKSHKHKSGGGSTTSSNVGSSSSSVDGGKKSGIGGGAIAGIVISVIVVGAIVAFFLARRKSKKTSSDLEKLDDQSFAPLPSNGVHEEKSEQTSSISDLKTFDTSASINLKPPPIDRHKSFDDEEFSKKPTIVKKTVTAPANVKSYSIADLQIATGSFSVDHLVGEGSFGRVYRAQFDDGEVLAVKKIDSSVLSNDLSDDFIEIISNISILHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHMNIKSANILLDAELNPHLSDSGLASYIPNADQILSHNVGSGYDAPEVALSGQYTLQSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALGKMVDPTLKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDLGGSQRGSDEAALREI* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04248 720 Gene3D Ribonuclease Inhibitor 34 181 IPR032675 -
Phac9g04248 720 PANTHER LEUCINE RICH REPEAT KINASE 2 70 694 - -
Phac9g04248 720 SUPERFAMILY L domain-like 28 232 - -
Phac9g04248 720 MobiDBLite consensus disorder prediction 323 353 - -
Phac9g04248 720 Pfam Protein tyrosine and serine/threonine kinase 417 686 IPR001245 GO:0004672|GO:0006468
Phac9g04248 720 MobiDBLite consensus disorder prediction 237 285 - -
Phac9g04248 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 491 - -
Phac9g04248 720 Gene3D Phosphorylase Kinase; domain 1 376 491 - -
Phac9g04248 720 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Phac9g04248 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 492 700 - -
Phac9g04248 720 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04248 720 MobiDBLite consensus disorder prediction 699 720 - -
Phac9g04248 720 Gene3D Ribonuclease Inhibitor 182 243 IPR032675 -
Phac9g04248 720 Gene3D Transferase(Phosphotransferase) domain 1 493 706 - -
Phac9g04248 720 Pfam Leucine Rich repeat 94 108 IPR001611 GO:0005515
Phac9g04248 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 253 - -
Phac9g04248 720 PRINTS Leucine-rich repeat signature 163 176 - -
Phac9g04248 720 PRINTS Leucine-rich repeat signature 96 109 - -
Phac9g04248 720 MobiDBLite consensus disorder prediction 264 285 - -
Phac9g04248 720 SUPERFAMILY Protein kinase-like (PK-like) 396 686 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04248 Phac-Chr9 40019111 40027914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04248 11 699 Strubbelig Receptor Gene Family AT1G53730 66.667 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phac9g04248 PK_Tyr_Ser-Thr 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04248 - - gmx:100807707 1177.54