Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04237 ATGTCACGTATTCTCCTCCTGAGTTTTGTTGGACTTCTTGTGTGCTTCCCATTTTCTTGTTCCCTCCAAGAGCAAGGGAAAGAGCTACAAACCCCTTTGCATCCAAACTCTTGCAATGAAACATGCGGGAACCTCCATGTTCCCTTTCCATTCTATGTCAACTCTTCTTGTGAGTCAATTTCCCCTGCCTTCCATCTCTCGTGCATAAATTCCACCACCCTTTTGCTCAGAATTGGCTCAGTGAGCTACACAGTCTTGGAATTCTTCCCAGATGGTGTGCTGGTGGACTTTCCCGGCTCATCATCCTGTAGACAGTACAATGACTTGAATTCTTTTGGCAGAAGCTTTGCAGGGAAGGACAACTTTGGAGTTTCGGTTGACAATGTTATTGGTCTCTATGACTGTGAGGATTCCTCTCTGTGCAAAGCAGATTGTGAAACTATTGACTTGCCTGGTTGTGATGGAAGGGGAGGAGGCTCCCTTGCCTGCTGCTATCCCCTCTCCGACCATACCGTATGGCATGTTGGTGATGGATTTTCGGTATTTTCTCAGTTTGGATGCAGGGGAGTTTCTAGTTGGGCCGTTTTGCGAGGTTCAACTTGGGGAAAACGTGGGGTGAAGTTGGAATGGGCACTGCCCAGAAACTCCTCTAAGCAAGTTTGTGCAAGGAATGCTAACATAGCCAATGCTACAGCAATCCAAGGAGGCGTGAGATGTGTCTGTCAAAATGGATATGTTGGTGATGGTTTTGCTGATGGAACTGGATGCTTGCAGGCCTGCATAAAGGACGGAAAGGAAGCTTATGGAAGTGACTGCTACATCAAAAGACATGATCAGAGGAAATTTGTTATCATTGCCGGAATCATTGGCCCAGTTCTGATTGTTGCCTCCCTGGTTGCACTATTTTATCTTCTTAAAAGGCCAACAAAACCAGGGATGTTTGACACTGAGCAGGCTTACTATCAAAACATTTCAATCCCCAAAGCTTGTAAAATTCGACTATTCAGTCTCCACGAGCTAGAGGAAGCCACAAAAGGCTTTGAAGAGAGTCAGAAACTTATGCATGCCAATAATGGGACAATTTTCGCTGGTGTTTTGAGGGATGGATCACACATAGCTGTTCACAAATTACAATGTGAGAAGAAAGACTTAATTCAAGTTCTGTCACAGATCGAGGTTCTGTCTTCTACTGTGCATAGAAACATGGCCCGCATTCTTGGTTGCTGCATTGAATCTGGCAACACTCTAGTAGTTTATGAGTTTCCTTGCAATGGTACTCTGGAGGAACATTTACATCAAAGCAAAGGACAACAACTTCGTTTGGATTGGTATAGGAGATTGACTATCGCTGCAGAAACAGCTAGCATTCTTGCATTCCTACACTACGACAACTCTCCTCCCATATTTCACCATAACCTTAAATCGGCATGCATCTTCCTAGATGATGATTACTCTGTCAAGATTGCAGGATTTGGTCTGATAAACTGCAATGTTTACTATGATTCTCAGTTACATAAGAACTACGAAGGCTTTGGCATCTGCAAAAATGATGTTTATGACATGGGTGTGTTGCTTCTTGAAATTATCTCAGGCTCAAATCGTTTGGATTTACCAACTTCAGCCTTGCAGCAAATAAGGGCTGGAAAATTTGAAGAAATTTTTGACCCTTTTCTTTGCTATCATGAACAACCACATTATCGGCAAGAGCAAATGCAGATCATTGCTGATCTTGCTACAAGATGCCTTCTATTTGGTGTAGATGGAAGGCTAGGAATGGTTGATGTTGTGAGGGAGTTAGTACACTTGACTAAAGAAAGTCTTGATGGGGGAATTACCAAAGGACCTGCACTGGAAGAGACTTTCTCAAATTCAAGCCTTCTTCAGATGATATCAATGTCTCCAGATTCTATGAGTGTCCCTTGA 1923 0.4332 MSRILLLSFVGLLVCFPFSCSLQEQGKELQTPLHPNSCNETCGNLHVPFPFYVNSSCESISPAFHLSCINSTTLLLRIGSVSYTVLEFFPDGVLVDFPGSSSCRQYNDLNSFGRSFAGKDNFGVSVDNVIGLYDCEDSSLCKADCETIDLPGCDGRGGGSLACCYPLSDHTVWHVGDGFSVFSQFGCRGVSSWAVLRGSTWGKRGVKLEWALPRNSSKQVCARNANIANATAIQGGVRCVCQNGYVGDGFADGTGCLQACIKDGKEAYGSDCYIKRHDQRKFVIIAGIIGPVLIVASLVALFYLLKRPTKPGMFDTEQAYYQNISIPKACKIRLFSLHELEEATKGFEESQKLMHANNGTIFAGVLRDGSHIAVHKLQCEKKDLIQVLSQIEVLSSTVHRNMARILGCCIESGNTLVVYEFPCNGTLEEHLHQSKGQQLRLDWYRRLTIAAETASILAFLHYDNSPPIFHHNLKSACIFLDDDYSVKIAGFGLINCNVYYDSQLHKNYEGFGICKNDVYDMGVLLLEIISGSNRLDLPTSALQQIRAGKFEEIFDPFLCYHEQPHYRQEQMQIIADLATRCLLFGVDGRLGMVDVVRELVHLTKESLDGGITKGPALEETFSNSSLLQMISMSPDSMSVP* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04237 640 Gene3D Transferase(Phosphotransferase) domain 1 423 504 - -
Phac9g04237 640 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 32 602 IPR045274 GO:0007166
Phac9g04237 640 ProSiteProfiles Protein kinase domain profile. 347 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04237 640 Pfam Protein tyrosine and serine/threonine kinase 350 505 IPR001245 GO:0004672|GO:0006468
Phac9g04237 640 FunFam probably inactive receptor-like protein kinase At2g46850 319 421 - -
Phac9g04237 640 Pfam Wall-associated receptor kinase galacturonan-binding 38 88 IPR025287 GO:0030247
Phac9g04237 640 Gene3D Transferase(Phosphotransferase) domain 1 505 608 - -
Phac9g04237 640 FunFam Putative WAK-related receptor-like protein kinase family protein 423 612 - -
Phac9g04237 640 Gene3D Phosphorylase Kinase; domain 1 314 421 - -
Phac9g04237 640 SUPERFAMILY Protein kinase-like (PK-like) 329 599 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04237 Phac-Chr9 39924534 39927859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04237 38 602 Receptor kinase-like Gene Family AT2G23450 28.666 4.33e-58 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac9g04237 PK_Tyr_Ser-Thr 1.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04237 - - vra:106760020 1164.06