Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04233 ATGGCAAGCCTTCCAAATTCAAGGTTCAATGGTGAAGAGAAGAGGAAGGAACCAGAACAACTAGAAGATGAAGAAAGCTTCCTGCGTGCCGCAGAGCTTACGAGTTCGGTGGTCCTTTCCATGGCACTGCAATCGGCGACGGAGCTGGGAGTGTTTCAGGTGCTGAAAGAAGCCGGAGAAGGTGCTAAGCTGTCTGCTGAGGAAATAGCATCAAAGATTAGTTGCAGTAACCCAGAAGCTGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCTTCTCACTCCATTCTTAACTCTTCTCTCATTTCCGACCACCGTGTTCCTCCCACCTTTCACCGCCTCTACACCATCACTCCCGTTGCCGCATTCTTTGCTCCCGATTCTGATGGAGTTTCCTTGGGACCCTTGATGGCCTTACTCCAAGACAAAATCTTCCTACAAAGCTGGACTGAGCTGAAAGACGCAATTAGGGAGGGGGGTGTTCCATTCAACAGAGTTTATGGCACTCATGCTTTTGACTATCCACGTTTGGACTCAAGATTCAATAAGGTTTTCAACACAGCAATGATGAATCAAACCACTATGGTGACGAAGAAGGTTCTGAAATCCTACAAAGGTTTTGAGGGCATAAAAACACTGGTGGATGTTGCTGGTGGTCTTGGAGTCAACATTAACTTGATCACTTCCAAATACCCTCATATCCATGGCATCAATTTTGACTTGCCTCATGTCATTCAAGATGCTCCTTCCTATCCTGGAGTGGAACATGTTGGGGGAGATATGTTTGAAAATGTGCCTAAAGGAGATGCCATATTTATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGTGTGAAACTGTTGAAAAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAGTCAGTTCTTCCAAAGATACCAGAGAATAATAATGCTTATAAGGCGATTGCACAAATAGATGTTTTGATGATGACTCAGAACCCGGGAGGTAAAGAGCGATCTGAAGAAGAGTTCATGAAATTGGCAAGAGCAGCTGGATTTAGTGGCATCAGATATGAATGTCGTGTCAACATTTTCTGGGTTATGGAGTTCTTCAAGTAG 1119 0.4433 MASLPNSRFNGEEKRKEPEQLEDEESFLRAAELTSSVVLSMALQSATELGVFQVLKEAGEGAKLSAEEIASKISCSNPEAASMLDRLLALLSSHSILNSSLISDHRVPPTFHRLYTITPVAAFFAPDSDGVSLGPLMALLQDKIFLQSWTELKDAIREGGVPFNRVYGTHAFDYPRLDSRFNKVFNTAMMNQTTMVTKKVLKSYKGFEGIKTLVDVAGGLGVNINLITSKYPHIHGINFDLPHVIQDAPSYPGVEHVGGDMFENVPKGDAIFMKWILHDWSDEHCVKLLKNCYDAIPDDGKVIVVESVLPKIPENNNAYKAIAQIDVLMMTQNPGGKERSEEEFMKLARAAGFSGIRYECRVNIFWVMEFFK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04233 372 SUPERFAMILY "Winged helix" DNA-binding domain 22 127 IPR036390 -
Phac9g04233 372 PANTHER O-METHYLTRANSFERASE 32 357 IPR016461 GO:0008168
Phac9g04233 372 MobiDBLite consensus disorder prediction 1 22 - -
Phac9g04233 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 370 IPR029063 -
Phac9g04233 372 PIRSF O-mtase 8 372 IPR016461 GO:0008168
Phac9g04233 372 Pfam Dimerisation domain 41 91 IPR012967 GO:0046983
Phac9g04233 372 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Phac9g04233 372 FunFam Caffeic acid O-methyltransferase 125 372 - -
Phac9g04233 372 Gene3D Vaccinia Virus protein VP39 126 372 IPR029063 -
Phac9g04233 372 FunFam Caffeic acid 3-O-methyltransferase 9 124 - -
Phac9g04233 372 Gene3D - 7 124 IPR036388 -
Phac9g04233 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 372 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04233 Phac-Chr9 39892726 39895482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04233 13 372 Monolignol Biosynthesis Gene Families AT5G54160 51.791 3.20e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04233 K13066 - gmx:100803633 583.948