Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04232 ATGCATTTTAAAGTAACAGAACAAGCTCATGTGGAGATGGCAAGTCTTCCAGATTCAAGGCTGAATGGTGAAGAGAAGAGCAAGGAAGAAGAAGAAACAGAAGATGCAGAAAGCTTCTCGCGTGCCATGCAGCTTGCCACTTCCGTGGTTCTTTCGATGGCAGTGCAATCGGCGACGGAGCTGGGAGTGTTTGAGGTGCTGAAAGAAGCGGGAGAAGGTGCTAAGCTGTCTGCTGAGGAAATAGCATCAAAGATTAGTTGCAGTAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCCTCTCACTCCATTCTTAACTCTTCTCTCATTTCCGACCACCGTGTTCCTCCCACCTTTCACCGCCTCTACACCATCACTCCCGTCGCCGCATTCTTTGCTCCCAATTCTGATGGAGTTTCCTTGGGACCCTTGATGGCCTTACTCCAAGACAAAATCTTCCTACAAAGCTGGAGTGAGCTGAAAGATGCAATTAGGGAGGGGGGTGTTCCATTCAACAGGGTTTTCAACACAGCAATGATCAATCGCACCACTTTGGTGATGAAGAAGGTTCTGGAATCCTACAAAGGTTTTGAGGGCATAAAAACACTGGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAACTTGATCACTTCCAAATACCCTCATATCCATGGCATCAATTTCGACTTGCCTAGTGTCATTCAAGATGCTCCTTCTTATCCTGGAGTGGAACATGTTGAGGGAGATATGTTTGAAAATGTGCCTAAAGGAGACGCCATATTTTTGAAGTGGATAGTTCATAATTGGAGTGATGAACATTGTGTGAAACTGTTGAAGAATTGCTACGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAGGCAATTCTTCCAAAAATACCAGAAACTAGTAATCCTTATAAGGAGGTTTCACAAATGGATGTTTTGATGATGACTCAGCACGAGGGAGGTAAAGAGCGTTGTGAAGAAGAGTTCATGATATTGGCAAGTGCAGCTGGATTTAGTGGCATAAGATATGAATGTCATATGGCAAGTCTTCCAGATTCAAGGCTGAATGGTGAAGAGAAGAGGAAGGCAGAAGAAGAAACAGAAGACGCAGAAAGCTTCTCGCGTGCCATGCAGCTTGCCACTTCCGTGGTTCTTTCGATGGCAGTGCAATCGGCGACGGAGCTGGGAGTGTTTGAGGTGCTGAAAGAAGCGGGAGAAGGTGCTAAGCTGTCTGCGAAGGAAATAGCATCAAAGATTAGTTGCAGTAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCTTCTCACTCCATTCTTAACTCTTCCCTCATTTCCGACCACCGTGTTCCTCCCACCTTTCACCGCCTCTACACCATCACTCCCGTCGCCGCATTCTTTGCTCCCAATTCTGATGGAGTTTCGTTGGGGCCCGTGATGGCCTTGCTCCAAGACAAAATCTTCCTGCAAAGCTGGTTCAACTCTCTCTCTTTCAACTATTATATTATTCATTTGCTCAAGAGTGAGCTGAAAGATGCAATTAGGGAGGGCGGTGTTCCATTCAACAGGGTTTATGGCACTCCTGCTTTTGAGTATGCACGTTTGGACTCAAGATTCAATAAGGTTTTCAACACAGCAATGATCAATCACACCACTTTGGTGATGAAGAAGGTTCTGGAATCCTACAAAGGTTTTGAGGGCATAAAAACACTGGTGGATGTTGCTGGTGGTCTTGGGATCAACATTAGCTTGATCACTTCCAAATACCCTCATATCCATGGCATCAATTTCGACTTGCCTCGTGTCATTCAAGATGCTCCTTCTTATCCTGGAGTGGAACATGTTGGGGGAGATATGTTTGAAAATGTGCCTAAAGGAGACGCCATATTTTTGAAGTGGATAGTTCATAATTGGAGTGATGAACATTGTGTGAAACTGTTGAAAAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAGGCAGTTCTTCCAAAAATACCAGAGACTAGTAATGCTTATAAGGAGGTTTCACAAATGGATGTTTTGATGATGACTCAGCACCAGGGAGGTAAAGAGCGTTGTGAAGAAGAGTTCATGATATTGGCAAGTGCAGCTGGATTTAGTGGCATCAGATATGAATGTCATATGGCAAGCCTTCCAAATTCAAGGCTGAATGGTGAAGAGAAGAGGAAGGAAGAAGAAGAAACAGAAGATGAAGAAAGCTTCTTGCGTGCCATACAGCTTACAAGTTCAGTGGTTCTTTCGATGGCAGTGCAATCAGCAACGGAGCTGGGTGTGTTTGAGGTGCTGAAAGAAGCGGGAGAAGGTGCTAAGCTGTCTGCTGAGGAAATAGCATCAAAGATTAGTTGCAGTAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCTTCTCACTCCATTCTTAACTCTTCTCTCATTTCCGACCACCGTCTTCCTCCCACCTTTCACCGCCTCTACACCATCACTCCCGTCGCCGCATTCTTTGTTCCCAATTCTGATGGAGTTTCGTTGGGGCCCGTGATGGCCTTGATCCAAGACAAGATCTCCCTACACAGCTGGTTAAACTCTCTCTCTCAACTATTATTATCATTATATGTCCCTTTCCATCACAAACATTTTCTTTGTTTATACGATTATTATAGGAGTGAGCTGAAAGATGCAATTAGGGAGGGGGGTGTTCCATTCAACAGGGTTTATGGTACTCATGCTTTTGAGTATGCACGTTTGGATTCAAGGTTCAATAAAGTTTTCAACACAGCAATGATGAACACCCCTTTGGTGATGAAGAAGGTTCTGGAAACCTACAAAGGTTTTGAGGGCATAAAAAGGGTGGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAAGTTGATCACTTCCAAGTACCCTCGTATCCATGGCATCAATTTCGATTTGCCTCATGTCATTCGAGATGCTCCTTCCTATTATCCTGGTATCATCCTTACAAATTCCAATCATGTCAACTTTGAGTTTTTACAAGACAATAACATAAATGGTGTGTACTATTTACTTTCGAATATTGCAGGAGTGGAACACGTTGAGGGAGACATGTTTGAAAATGTGCCTAAAGGAGACGCCATATTTATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGTGTGAAATTGTTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTATGGAAGCAATTCTTCCACAAATACCTGAGAATAATAATGCTTATAAGGCTGTTGCACAAATGGATGTTGCGATGATGACTCAGAACCCGGGAGGTAAAGAGCGATCTGAAGAAGAGTTCATGAAATTGGCAAGAGCAGCTGGATTTAGTGGCATCAGATATGAATGTCGTGTCAACATTTTCTGGATGGCAACCCTTCCAGATTCAACTCTGAATGCTGAAGAAAAGAGGAAGGAAGAAGAGATACAAGATGCAGAAAGCTTCTCGCATGCCATGGAGCTTGTAGGTTCGGTGGTCCTTCCGATGGCACTGCAATCGGCGACGGAGCTCGGAGTGTTTGAGGTGCTGAAAGAAGCGGGAGAAGGTGCTAAGCTGTCTGCGAAGGAAATAGCATCAAAGATTAGTTGCAGTAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCTTCTCACTCCATTCTTAACTCTTCCCTCATTTCCGACCACCGTGTTCCTCCCACCTTTCACCGCCTCTACACCATCACTCCCGTCGCCGCATTCTTTGCTCCCGATTCTTATGGAGTTTCGTTGGGGCCCGTTTTCAACACAGCTATGATCAATCACACCACTTTGGTGATGAAGAAGGTTCTGGAAACCTACAAAGGTTTTGAGGGCATAAAAAGGGTGGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAACTTGATCACTTCCAAGTACCCTCGTATCCATGGCATCAATTTCGATTTGCCTCATTGGATACTTCATGACTGGAGTGATGAACATTGTGTGAAGCTGTTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAGACAATTCTTCCAAAGTTACCAGAGACTAATCATACTTATAAGGCGATTGCACAAATGGATGTTGCGATGATGACTCATTACCAGGGAGGTAAAGAGCGATGTGAAGAAGAGTTCATGGAATTGGCAAGAGCAGCTGGATTCAGTGGCATCAGATATGAATGTCACGTCAACATTTTAGGGGTTATGGAGTTCTTCAAGCTGAATGGTGAAGAGAAGAGGAAGGAAGAAGAAGAAACAGAAGATGCAGAAAGCTTCTCGCGTGCCATGCAGCTTGCCACTTCCGTGGTCCTTTCGATGGCAGTGCAATCGGCGACGGAGCTGGGAGTGTTTGAGGTGCTGAAAGAAGCGGGAGAAGGTGCTAAGCTGTCTGCTAAGGAAATAGCATCAAAGATTAGTTGCAGTAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCCTCTCACTCCATTCTTAACTCTTCTCTCATTTCCGACCACCGTGTTCCTCCCACCTTTCACCGCCTCTACACCATCACTCCCGTCGCCGCATTCTTTGCTCCCAATTCTGATGGAGTTTCGCTGGGGCCCGTGATGGCCTTGCTCCAAGACAAAATCTTCCTGCAAAGCTGGTTCAACTCTCTCTCTTTCAACTATTATATTATTCATTTGCTCAAGAGTGAGCTGAAAGATGCAATTAGGGAGGGGGGTGTTCCATTCAACAGGGTTTATGGAACTCATGCTTTTGACTATCCACGTTTGGACTCGAGATTTAATAAGGTTTTCAACACAGCAATGATCAATCACACCACTTTGGTGATGAAGAAAGTTCTGGAATCCTACAAAGGTTTTGAGGGCATAAAAACACTGGTGGATGTTGCTGGTGGTCTTGGAATCAACATTAACTTGATCACTTCTAAATACCCTCATATTCATGGCATCAATTTTGACTTGCCTCATGTCATTCAAGAGGCTCCTTCCTATCCTGGAGTAGAACACGTTGGGGGAGATATGTTTGAAAATGTGCCTAAAGGAGACGCCATATTTATGAAGTGGATAATTCACGATTGGAGTGATGAACATTGTGTGAAGCTGTTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAGGCAGTTCTTCCAAAAATACCAGAGACTAATAATGCTTATAAGGGGGTTTCACAAATGGATGTTTTGATGATGACTCAGCACGAGGGAGGTAAAGAGCGTTCTGAAGAAGAGTTCATGATATTGGCAAAAGCAGCTGGATTTAGTGGCATCAGATATGAATGTCATGTCAACAATTTTTGGGTTATGGAATTCTTCAAAAAGTGA 5487 0.4427 MHFKVTEQAHVEMASLPDSRLNGEEKSKEEEETEDAESFSRAMQLATSVVLSMAVQSATELGVFEVLKEAGEGAKLSAEEIASKISCSNPEAASMLDRLLALLSSHSILNSSLISDHRVPPTFHRLYTITPVAAFFAPNSDGVSLGPLMALLQDKIFLQSWSELKDAIREGGVPFNRVFNTAMINRTTLVMKKVLESYKGFEGIKTLVDVGGGLGININLITSKYPHIHGINFDLPSVIQDAPSYPGVEHVEGDMFENVPKGDAIFLKWIVHNWSDEHCVKLLKNCYDAIPDDGKVIVVEAILPKIPETSNPYKEVSQMDVLMMTQHEGGKERCEEEFMILASAAGFSGIRYECHMASLPDSRLNGEEKRKAEEETEDAESFSRAMQLATSVVLSMAVQSATELGVFEVLKEAGEGAKLSAKEIASKISCSNPEAASMLDRLLALLSSHSILNSSLISDHRVPPTFHRLYTITPVAAFFAPNSDGVSLGPVMALLQDKIFLQSWFNSLSFNYYIIHLLKSELKDAIREGGVPFNRVYGTPAFEYARLDSRFNKVFNTAMINHTTLVMKKVLESYKGFEGIKTLVDVAGGLGINISLITSKYPHIHGINFDLPRVIQDAPSYPGVEHVGGDMFENVPKGDAIFLKWIVHNWSDEHCVKLLKNCYDAIPDDGKVIVVEAVLPKIPETSNAYKEVSQMDVLMMTQHQGGKERCEEEFMILASAAGFSGIRYECHMASLPNSRLNGEEKRKEEEETEDEESFLRAIQLTSSVVLSMAVQSATELGVFEVLKEAGEGAKLSAEEIASKISCSNPEAASMLDRLLALLSSHSILNSSLISDHRLPPTFHRLYTITPVAAFFVPNSDGVSLGPVMALIQDKISLHSWLNSLSQLLLSLYVPFHHKHFLCLYDYYRSELKDAIREGGVPFNRVYGTHAFEYARLDSRFNKVFNTAMMNTPLVMKKVLETYKGFEGIKRVVDVGGGLGINIKLITSKYPRIHGINFDLPHVIRDAPSYYPGIILTNSNHVNFEFLQDNNINGVYYLLSNIAGVEHVEGDMFENVPKGDAIFMKWILHDWSDEHCVKLLKNCYDAIPDDGKVIVMEAILPQIPENNNAYKAVAQMDVAMMTQNPGGKERSEEEFMKLARAAGFSGIRYECRVNIFWMATLPDSTLNAEEKRKEEEIQDAESFSHAMELVGSVVLPMALQSATELGVFEVLKEAGEGAKLSAKEIASKISCSNPEAASMLDRLLALLSSHSILNSSLISDHRVPPTFHRLYTITPVAAFFAPDSYGVSLGPVFNTAMINHTTLVMKKVLETYKGFEGIKRVVDVGGGLGININLITSKYPRIHGINFDLPHWILHDWSDEHCVKLLKNCYDAIPDDGKVIVVETILPKLPETNHTYKAIAQMDVAMMTHYQGGKERCEEEFMELARAAGFSGIRYECHVNILGVMEFFKLNGEEKRKEEEETEDAESFSRAMQLATSVVLSMAVQSATELGVFEVLKEAGEGAKLSAKEIASKISCSNPEAASMLDRLLALLSSHSILNSSLISDHRVPPTFHRLYTITPVAAFFAPNSDGVSLGPVMALLQDKIFLQSWFNSLSFNYYIIHLLKSELKDAIREGGVPFNRVYGTHAFDYPRLDSRFNKVFNTAMINHTTLVMKKVLESYKGFEGIKTLVDVAGGLGININLITSKYPHIHGINFDLPHVIQEAPSYPGVEHVGGDMFENVPKGDAIFMKWIIHDWSDEHCVKLLKNCYDAIPDDGKVIVVEAVLPKIPETNNAYKGVSQMDVLMMTQHEGGKERSEEEFMILAKAAGFSGIRYECHVNNFWVMEFFKK* 1829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04232 1828 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 909 1151 IPR029063 -
Phac9g04232 1828 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 141 354 IPR029063 -
Phac9g04232 1828 Gene3D - 738 855 IPR036388 -
Phac9g04232 1828 Gene3D - 1449 1564 IPR036388 -
Phac9g04232 1828 Gene3D - 1162 1279 IPR036388 -
Phac9g04232 1828 MobiDBLite consensus disorder prediction 14 38 - -
Phac9g04232 1828 FunFam Caffeic acid 3-O-methyltransferase 1449 1564 - -
Phac9g04232 1828 PANTHER O-METHYLTRANSFERASE 1470 1812 IPR016461 GO:0008168
Phac9g04232 1828 SUPERFAMILY "Winged helix" DNA-binding domain 376 482 IPR036390 -
Phac9g04232 1828 Gene3D Vaccinia Virus protein VP39 1285 1351 IPR029063 -
Phac9g04232 1828 Gene3D Vaccinia Virus protein VP39 1352 1448 IPR029063 -
Phac9g04232 1828 Gene3D Vaccinia Virus protein VP39 1566 1827 IPR029063 -
Phac9g04232 1828 FunFam Caffeic acid 3-O-methyltransferase 1163 1279 - -
Phac9g04232 1828 FunFam Caffeic acid 3-O-methyltransferase 20 136 - -
Phac9g04232 1828 FunFam Caffeic acid O-methyltransferase 1565 1827 - -
Phac9g04232 1828 SUPERFAMILY "Winged helix" DNA-binding domain 752 858 IPR036390 -
Phac9g04232 1828 Gene3D - 50 194 IPR036388 -
Phac9g04232 1828 SUPERFAMILY "Winged helix" DNA-binding domain 33 139 IPR036390 -
Phac9g04232 1828 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1282 1445 IPR029063 -
Phac9g04232 1828 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1332 1448 IPR016461 GO:0008168
Phac9g04232 1828 Gene3D - 393 570 IPR036388 -
Phac9g04232 1828 MobiDBLite consensus disorder prediction 19 38 - -
Phac9g04232 1828 FunFam Caffeic acid 3-O-methyltransferase 363 479 - -
Phac9g04232 1828 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 520 730 IPR029063 -
Phac9g04232 1828 Gene3D Vaccinia Virus protein VP39 552 731 IPR029063 -
Phac9g04232 1828 Gene3D Vaccinia Virus protein VP39 176 355 IPR029063 -
Phac9g04232 1828 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 386 744 IPR016461 GO:0008168
Phac9g04232 1828 Pfam Dimerisation domain 772 822 IPR012967 GO:0046983
Phac9g04232 1828 Pfam Dimerisation domain 1196 1246 IPR012967 GO:0046983
Phac9g04232 1828 Pfam Dimerisation domain 1481 1531 IPR012967 GO:0046983
Phac9g04232 1828 Pfam Dimerisation domain 53 103 IPR012967 GO:0046983
Phac9g04232 1828 Pfam Dimerisation domain 396 446 IPR012967 GO:0046983
Phac9g04232 1828 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1605 1825 IPR029063 -
Phac9g04232 1828 FunFam Caffeic acid 3-O-methyltransferase 739 855 - -
Phac9g04232 1828 Pfam O-methyltransferase domain 909 1013 IPR001077 GO:0008171
Phac9g04232 1828 Pfam O-methyltransferase domain 521 724 IPR001077 GO:0008171
Phac9g04232 1828 Pfam O-methyltransferase domain 1606 1809 IPR001077 GO:0008171
Phac9g04232 1828 Pfam O-methyltransferase domain 174 348 IPR001077 GO:0008171
Phac9g04232 1828 Pfam O-methyltransferase domain 1042 1144 IPR001077 GO:0008171
Phac9g04232 1828 Pfam O-methyltransferase domain 1351 1430 IPR001077 GO:0008171
Phac9g04232 1828 SUPERFAMILY "Winged helix" DNA-binding domain 1178 1282 IPR036390 -
Phac9g04232 1828 Coils Coil 1827 1828 - -
Phac9g04232 1828 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1471 1827 IPR016461 GO:0008168
Phac9g04232 1828 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 762 1162 IPR016461 GO:0008168
Phac9g04232 1828 FunFam Caffeic acid O-methyltransferase 480 737 - -
Phac9g04232 1828 Gene3D Vaccinia Virus protein VP39 857 1159 IPR029063 -
Phac9g04232 1828 SUPERFAMILY "Winged helix" DNA-binding domain 1461 1567 IPR036390 -
Phac9g04232 1828 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 368 IPR016461 GO:0008168
Phac9g04232 1828 CDD AdoMet_MTases 970 1095 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04232 Phac-Chr9 39859858 39892661 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04232 375 730 Monolignol Biosynthesis Gene Families AT5G54160 51.532 9.72e-122 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04232 K13066 - atri:130825451 654.055