Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04231 ATGGCTGAAACGTTGGAATCAGGTAGAGAAGTTGTGAATGGGAGAGAGGAGCATCTTAAACGGGAAGAAGAAGAAGATGAGTTGACGTTTTGCATGGAAAAGATGGTTTCGTTTGTGGTTCCAATGGCTCTGAGGACATTGTTTGAGCTGGGGGTGTTTGATATCTTAGCCAAAAATGGTGGCAAACTCAGTGCAAAAGAGATTGCATTTGAGATAGGTAGCAACAACCCTGAAGCTCCTGCAATGTTGGATCGTCTTCTTACCCTTTTGGTTACTCACTCTCTGCTATCTTGCTCCATCACTCAAGAAGAAGCACACCCTCAGAGGGGCGAACTGAAAGGAGCAATCCTAGAAGGGGGTGTAGCATTCGACAGGGCTCATGGCATGAATGCCTTCGAATATCCACGTGTGGATCCCAGGTTTAACGAGGTTTTCAACAACGGTATGATAGGCCTCACCACTGTGATTACGAAGAGGATTCTTGAGTTATACAATGGTTTTGAGCATGTCACTAGGCTCGTTGATGTTGGTGGAGGTTATGGGGTCAACCTCAAATTGATCACATCCAAATACCCTCACATTCAGGCTATAAATTTTGACTTGCCTCATGTAGTGGAAAATGCCCCCCTCCATTCAGGTATTATCTATGATTTTTTATTATGA 663 0.4419 MAETLESGREVVNGREEHLKREEEEDELTFCMEKMVSFVVPMALRTLFELGVFDILAKNGGKLSAKEIAFEIGSNNPEAPAMLDRLLTLLVTHSLLSCSITQEEAHPQRGELKGAILEGGVAFDRAHGMNAFEYPRVDPRFNEVFNNGMIGLTTVITKRILELYNGFEHVTRLVDVGGGYGVNLKLITSKYPHIQAINFDLPHVVENAPLHSGIIYDFLL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04231 220 Gene3D Vaccinia Virus protein VP39 150 209 IPR029063 -
Phac9g04231 220 FunFam Caffeic acid 3-O-methyltransferase 12 112 - -
Phac9g04231 220 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 211 IPR029063 -
Phac9g04231 220 Gene3D - 9 111 IPR036388 -
Phac9g04231 220 SUPERFAMILY "Winged helix" DNA-binding domain 22 105 IPR036390 -
Phac9g04231 220 MobiDBLite consensus disorder prediction 1 22 - -
Phac9g04231 220 Gene3D - 112 149 - -
Phac9g04231 220 PANTHER O-METHYLTRANSFERASE 37 208 IPR016461 GO:0008168
Phac9g04231 220 Pfam Dimerisation domain 42 91 IPR012967 GO:0046983
Phac9g04231 220 Pfam O-methyltransferase domain 111 211 IPR001077 GO:0008171
Phac9g04231 220 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 220 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04231 Phac-Chr9 39858961 39859822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04231 24 214 Monolignol Biosynthesis Gene Families AT5G54160 43.860 1.37e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04231 K13066 - gmx:100789402 228.409