Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04227 ATGGGTGAAGTGGCAGGTGAGAAGTGTGTGATGCAGATGCAGGGGGAACAGGGCAACAATGCCTCCACGGTTCGGTGGGAACGTTTTCTGCCTCGGATGGTGCTTCGTGTGTTGCTTGTGGAAGCTGATGATTCTACTCGACAGATCATTGCTGCACTTCTCCGTAAATGCAGTTACAAAGTTTCCACAGTTTGTGATGGCTTAAAGGCATGGGAGACATTGAAGAACAAAGCATCTGACATAGATCTCATATTAACTGAAGTGGATTTGCCATCAATATCTGGATTTTCTCTTCTTAGTTTAGTCATGGAGCATGAAGTTTGCAAAAACATTCCCGTCATAATGATGTCTTCTCATGATTCAGTTAACATGGCGTTCAGATGCATGTTAAAAGGTGCAGCTGATTTTCTTATAAAACCTGTTCGCAAGAATGAGCTTAGAAACTTGTGGCAGCATGTGTGGAGATGGCATGTTATTGAACTTGGTTTTGCTGCAGAAAATCATGCTGCAAGCAATGATTCTAGCGGTTCTGTGGCTTCGACACCAAAAAATAATGAATGCAGCGAGAAAACAAGTGAGGCTCAAGATATTTCACAGCTGAAGACTTCTTCAAATTTGAGTGATATTGGCACAGTTAAGCATGAAAACTCTACAAAATGTGAAAGGGAATCAGATGAGCATAATGACGAAGCTGGAGCCAAATCAATATTTATATCAGAAGATGAAGGGTGCAACAAAACTTTTAAACCAACAGGCTTAAGGCTAGGTCAAGGCTGTGATTTTGGTGAAATGAGAAATCAGGATGAAGTTCTAAGAATAGAGTTGAGCAAAGCCAATCCTGAGATTAATGTCGATATTCATGGATGCAGTGATGAATTGGAAGGCCCTTCTACTGGAGCCATTGACTTGATTGGTACATTCAAGACACTTCCAAAGAGCACTGATGAAAATTGTAGTTTCAGTAGTGGAAACATTGCCAAGTTTGACTTTGATACACAATTGGAACTTTCTATAAGAAGATATTTTCCTGGAAACTCATACAAAGCTGTATCTGAAGAAAGGCAAATATTGAACCATTCAAATGCTTCTGCCTTTTCTAGGTATGGTGGTAGTAAGTTGTTGCAGACCCTTTGTCCAACACCATCAACTATCTCTGCAAAATTAACAAACGATAATGATTCTCAGAAATCCCATAAGTTATCTGAAAACACATCAACTTCTGATCAATATGGTGCAGAAAATCAAATTAAGGAGAAAATCACCACTTCAGATATTGGTCAATCTGGACAAGTTGATCCAAATTTACCAAACCGTCAACTTGGATTCTTTCCTGCTACAGGGGTGACTTATGATCACAAGTCTACTGGAAATGGAAATGTCTTCCCTTCTATGCTTTATTCTCAATCAGTTGTCCATCCCATATGGACTCCAAAATCAGTGTTCCAGAAAGAGAGCTCTCCATTTCCCACAAGTACTTCCTCCCAGTCTAATCCTCAATCTCGCGACTTAAAACATCATCGCTGGTCTGACGATGCAACCCATGCTTCTGATCAAAATGTAAATGATCAAAGCCATTTGGATTTTGAGACACAGGACTCTCCGACTGCTAGTCAGAGTGCTGATACTGCTCTTTACCATGATACAACAAATCATGATAGTAGTGGCGTGTACAGAAGCATAGGCTGCAGAAGTGAAGGAAATGCTACTTCAGCTAAGGTAGCCAAGGACAACCATGAAAGTGTCATTGATATTGGTCACCTCGGTTATGATGGATTCATAGGGACAGATTCTCATCGCACCAGCCAACGAGAAGCAGCTCTAACAAAGTTTCGACTTAAGCGGAAAGACAGATGCTACGAGAAAAAGGTCCGATATCAAAGCCGGAAGAGATTGGCAGAGCAGCGCCCTCGGGTGAAAGGGCAATTTGTTCGCCAAGTACACAGTGATCATCCAGTATCAGATCTGGGTGGTGATTCTTGA 1980 0.4131 MGEVAGEKCVMQMQGEQGNNASTVRWERFLPRMVLRVLLVEADDSTRQIIAALLRKCSYKVSTVCDGLKAWETLKNKASDIDLILTEVDLPSISGFSLLSLVMEHEVCKNIPVIMMSSHDSVNMAFRCMLKGAADFLIKPVRKNELRNLWQHVWRWHVIELGFAAENHAASNDSSGSVASTPKNNECSEKTSEAQDISQLKTSSNLSDIGTVKHENSTKCERESDEHNDEAGAKSIFISEDEGCNKTFKPTGLRLGQGCDFGEMRNQDEVLRIELSKANPEINVDIHGCSDELEGPSTGAIDLIGTFKTLPKSTDENCSFSSGNIAKFDFDTQLELSIRRYFPGNSYKAVSEERQILNHSNASAFSRYGGSKLLQTLCPTPSTISAKLTNDNDSQKSHKLSENTSTSDQYGAENQIKEKITTSDIGQSGQVDPNLPNRQLGFFPATGVTYDHKSTGNGNVFPSMLYSQSVVHPIWTPKSVFQKESSPFPTSTSSQSNPQSRDLKHHRWSDDATHASDQNVNDQSHLDFETQDSPTASQSADTALYHDTTNHDSSGVYRSIGCRSEGNATSAKVAKDNHESVIDIGHLGYDGFIGTDSHRTSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQVHSDHPVSDLGGDS* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04227 659 CDD psREC_PRR 37 140 - -
Phac9g04227 659 SMART REC_2 35 150 IPR001789 GO:0000160
Phac9g04227 659 MobiDBLite consensus disorder prediction 482 539 - -
Phac9g04227 659 MobiDBLite consensus disorder prediction 514 539 - -
Phac9g04227 659 Pfam CCT motif 603 645 IPR010402 GO:0005515
Phac9g04227 659 Gene3D - 33 240 - -
Phac9g04227 659 MobiDBLite consensus disorder prediction 399 413 - -
Phac9g04227 659 MobiDBLite consensus disorder prediction 629 644 - -
Phac9g04227 659 MobiDBLite consensus disorder prediction 170 231 - -
Phac9g04227 659 ProSiteProfiles Response regulatory domain profile. 36 154 IPR001789 GO:0000160
Phac9g04227 659 MobiDBLite consensus disorder prediction 214 231 - -
Phac9g04227 659 MobiDBLite consensus disorder prediction 629 659 - -
Phac9g04227 659 Pfam Response regulator receiver domain 37 148 IPR001789 GO:0000160
Phac9g04227 659 MobiDBLite consensus disorder prediction 385 413 - -
Phac9g04227 659 MobiDBLite consensus disorder prediction 482 499 - -
Phac9g04227 659 MobiDBLite consensus disorder prediction 170 213 - -
Phac9g04227 659 PANTHER TWO-COMPONENT RESPONSE REGULATOR 35 283 IPR045279 GO:0009736
Phac9g04227 659 ProSiteProfiles CCT domain profile. 603 645 IPR010402 GO:0005515
Phac9g04227 659 SUPERFAMILY CheY-like 35 160 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04227 Phac-Chr9 39844241 39852138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04227 24 648 Response Regulator Gene Family AT5G24470 36.725 7.65e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Phac9g04227 Response_reg 3.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04227 K12130 - gmx:100779346 1025.77